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GlfTrio (view source)

Revision as of 00:51, 15 November 2009

39 bytes added ,  00:51, 15 November 2009
→‎Basic Usage Example
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   glfTrio -f NA19239.chrom20.SLX.glf -m NA19238.chrom20.SLX.glf -c NA19240.chrom20.SLX.glf \
 
   glfTrio -f NA19239.chrom20.SLX.glf -m NA19238.chrom20.SLX.glf -c NA19240.chrom20.SLX.glf \
 
           --father NA19239 --mother NA19238 --child NA19240 \
 
           --father NA19239 --mother NA19238 --child NA19240 \
−
           --minMapQuality 30 \
+
           --minMapQuality 30 --minTotalDepth 0 --maxTotalDepth 1000 \
 
           -b YRI.chrom20.SLX.vcf > YRI.chrom20.SLX.log
 
           -b YRI.chrom20.SLX.vcf > YRI.chrom20.SLX.log
  
Retrieved from "http://genome.sph.umich.edu/wiki/Special:MobileDiff/49"

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