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Jump to navigationJump to search→Running GotCloud Software: Remove broken links. Update pipeline status.
** [[GotCloud: Alignment Sub-Pipelines|Alignment Sub-Pipelines]] - for if you do not want to run the entire Alignment Pipeline
** [[GotCloud: Alignment Sub-Pipelines|Alignment Sub-Pipelines]] - for if you do not want to run the entire Alignment Pipeline
* [[GotCloud: Variant Calling Pipeline|Variant Calling Pipeline]]
* [[GotCloud: Variant Calling Pipeline|Variant Calling Pipeline]]
* [[GotCloud: Indel Calling Pipeline|Indel Calling Pipeline]]
* Indel Calling Pipeline
* [[GotCloud: GenomeSTRiP Pipeline|GenomeSTRiP Pipeline]] (Structural Variation) - ''Coming Soon''
* [[GotCloud: GenomeSTRiP Pipeline|GenomeSTRiP Pipeline]] (Structural Variation)
* [[GotCloud: MEI Calling Pipeline|MEI Calling Pipeline]] - ''Coming Soon''
* MEI Calling Pipeline - ''Ask if you're interested''
You can also create your own pipelines. Instructions are here:
You can also create your own pipelines. Instructions are here:
