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15 bytes added
, 00:01, 21 February 2013
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| == Running the GotCloud Mapping Pipeline == | | == Running the GotCloud Mapping Pipeline == |
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| The mapping pipeline is run using the <code>gen_biopipeline.pl</code> script found in the <code>bin/</code> directory under the <code>gotcloud/</code> installation. | | The mapping pipeline is run using the <code>gen_biopipeline.pl</code> script found in the <code>bin/</code> directory under the <code>gotcloud/</code> installation. |
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| ===Running the Automatic Test=== | | ===Running the Automatic Test=== |
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− | The automatic tests run GotCloud on small testsets and check the results against expected results validating that GotCloud is installed correctly. | + | The automatic test runs the mapping pipeline on a small testset and checks the results against expected results validating that GotCloud is installed correctly. |
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| *Run alignment pipeline test: | | *Run alignment pipeline test: |