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Revision as of 21:25, 18 March 2015
, 21:25, 18 March 2015→Inputs
====Inputs====
====Inputs====
* Single merged, recalibrated, and deduped BAM file
* Single merged, recalibrated, and deduped BAM file for each subject (stored in a BAM_LIST File)
* Reference files
* Reference files
* (Optional) configuration file to override default options
* (Optional) configuration file to override default options
