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The GotCloud software is distributed in several Debian packages. These can be installed on traditional Debian systems as well as Ubuntu (where it has been tested). The software should run on all versions from Ubuntu Lucid (9.04) through Oneric (12.10). It has not been tested on other Debian systems, but it is likely it will work on those systems too. This software should work on any Unix system - only requiring recompilation from the source files.
The GotCloud software is distributed in several Debian packages. These can be installed on traditional Debian systems as well as Ubuntu (where it has been tested). The software should run on all versions from Ubuntu Lucid (9.04) through Oneric (12.10). It has not been tested on other Debian systems, but it is likely it will work on those systems too. This software should work on any Unix system - only requiring recompilation from the source files.
The software is distributed in a single package including both the ''aligner'' and ''variant caller''. There is also a package to test the installation. The following naming conventions are used:
The software is distributed in a single package including both the ''aligner'' and ''variant caller''. There is also a package to test the installation.
The debian files are available for download from ftp://share.sph.umich.edu/gotcloud/ :
<code>
<code>
gotcloud-bin_M.n_amd64.deb aligner and variant caller
gotcloud-bin_latest_amd64.deb aligner and variant caller
gotcloud-test_M.n_amd64.deb test data for software
gotcloud-test_latest_amd64.deb test data for software
M.n/gotcloud-bin_M.n_amd64.deb version M.n of aligner and variant caller
M.n/gotcloud-test_M.n_amd64.deb version M.n of test data for software
</code>
</code>
Where 'M.n' is replaced with the specific version numbers.
See [[GotCloud: Versions]] for details on the changes for each version.
===Fetch the GotCloud Debian Packages===
===Fetch the GotCloud Debian Packages===
