Changes

From Genome Analysis Wiki
Jump to navigationJump to search
Line 113: Line 113:     
<code>
 
<code>
   #  Test the aligner (2 minutes +/- 1 minute)
+
   #  Test the aligner (3 minutes +/- 1 minute)
 
   '''/usr/local/gotcloud/bin/gotcloud align -test ~/testalign'''
 
   '''/usr/local/gotcloud/bin/gotcloud align -test ~/testalign'''
 
   Removing any previous results from: /home/myuser/testalign/aligntest
 
   Removing any previous results from: /home/myuser/testalign/aligntest
Line 128: Line 128:  
    
 
    
 
    
 
    
   #  Test snp calling  (5 minutes +/-2 minute)
+
   #  Test snp calling  (7 minutes +/-2 minute)
 
   '''/usr/local/gotcloud/bin/gotcloud snpcall --test ~/testsnp'''
 
   '''/usr/local/gotcloud/bin/gotcloud snpcall --test ~/testsnp'''
 
   Removing any previous results from: /home/myuser/testsnp/umaketest
 
   Removing any previous results from: /home/myuser/testsnp/umaketest

Navigation menu