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=GotCloud Debian Packages=
Back to parent: [[GotCloud]]
The [[GotCloud]] software has been developed and tested on Linux Ubuntu 12.10 and 12.04.2 LTS. While it should work on other Linux systems, they have not yet been tested. It is not supported on Windows.
If you run into any problems with GotCloud, please check: [[GotCloud: FAQs]] or for problems/solutions for a specific version, [[GotCloud:_FAQs#Version_Problems|Version Problems]].
=GotCloud Binary Releases=
GotCloud releases with the precompiled binary executables are available for download.
The binaries were compiled on Linux Ubuntu.
If you need the source, see [[GotCloud: Source Releases]] for information on obtaining the source.
The Binary Releases are available as:
* [[#Debian Packages|debian packages]] - require root access to install
* [[#Tar Binary Releases|tarballs]] - anyone can untar
The GotCloud software is distributed in several packages. These can be installed on traditional Debian systems as well as Ubuntu (where it has been tested). The software should run on all versions from Ubuntu Lucid (9.04) through Oneric (12.10). It has not been tested on other Debian systems, but it is likely it will work on those systems too. This software should work on any Unix system - only requiring recompilation from the source files.
The software is distributed in a single package including both the ''aligner'' and ''variant caller''.
There is also a separate package to test the installation.
==Installing Debian Packages==
=GotCloud Debian Packages=
Installing Debian packages requires root access.
If you would like to install from:
* tar'd binary packages, see: [[#Tar Binary Releases|Tar Binary Releases]]
* source (does not require root access), see: [[GotCloud: Source Releases]]
== Installing Debian Packages ==
The debian files are available for download from ftp://share.sph.umich.edu/gotcloud/ :
The debian files are available for download from ftp://share.sph.umich.edu/gotcloud/ :
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</code>
Login as a normal user (ubuntu, not as root) and do:
Login as a normal user (not as root) and do:
<code>
<code>
</code>
</code>
=Creating Your Own Debian Package From the Source=
The process to create your own Debian package from the source files is straight-forward
The process to create your own Debian package from the source files is straight-forward
