3,045
edits
Changes
From Genome Analysis Wiki
Jump to navigationJump to searchGotCloud: Genetic Reference and Resource Files (view source)
Revision as of 13:47, 23 October 2014
, 13:47, 23 October 2014no edit summary
=== DBSNP VCF File ===
=== DBSNP VCF File ===
VCF file containing known dbsnp variant positions
VCF file containing known dbsnp variant positions
* Must be gzip'd and tabix'd
* Must be bgzip'd and tabix'd
{| class="wikitable" style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
{| class="wikitable" style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
=== HapMap3 VCF File ===
=== HapMap3 VCF File ===
HapMap3 Polymorphic Sites VCF File
HapMap3 Polymorphic Sites VCF File
* Must be gzip'd and tabix'd
* Must be bgzip'd and tabix'd
{| class="wikitable" style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
{| class="wikitable" style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
=== OMNI VCF File ===
=== OMNI VCF File ===
VCF file containing OMNI positions
VCF file containing OMNI positions
* Must be gzip'd and tabix'd
* Must be bgzip'd and tabix'd
{| class="wikitable" style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
{| class="wikitable" style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
=== INDEL VCF File(s) ===
=== INDEL VCF File(s) ===
VCF file containing OMNI positions
VCF file containing OMNI positions
* Must be gzip'd and tabix'd
* Must be bgzip'd and tabix'd
{| class="wikitable" style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
{| class="wikitable" style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1"
