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Revision as of 14:06, 23 October 2014
, 14:06, 23 October 2014→INDEL VCF File(s)
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* Use <code>INDEL_PREFIX</code> if <code>path/</code> contains a separate file for each chromosome in the format:<code>indels.sites.hg19.chr20.vcf</code> for each chromosome being processed
* Use <code>INDEL_PREFIX</code> if <code>path/</code> contains a separate file for each chromosome in the format: <code>indels.sites.hg19.chr#.vcf</code> for each <code>#</code> chromosome being processed
* Use <code>INDEL_VCF</code> if you have all chromosomes in a single VCF file (it can be, but does not have to be a gz file)
* Use <code>INDEL_VCF</code> if you have all chromosomes in a single VCF file (it can be, but does not have to be a gz file)
