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81 bytes added
, 12:00, 14 May 2015
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| ! Configuration Key !! Default Value | | ! Configuration Key !! Default Value |
| |- | | |- |
− | | DBSNP_VCF || $(REF_DIR)/dbsnp_135.b37.vcf.gz | + | | DBSNP_VCF || $(REF_DIR)/dbsnp_142.b37.vcf.gz |
| |} | | |} |
| {| class="wikitable" style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1" | | {| class="wikitable" style="margin: 1em 1em 1em 0; background-color: #f9f9f9; border: 1px #aaa solid; border-collapse: collapse;" border="1" |
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| | | |
| <ul> | | <ul> |
− | <li> Human reference 37, dbsnp 135:</li> | + | <li> <div id="h37-db135">Human reference 37, dbsnp 135:</div></li> |
| <b>wget ftp://anonymous@share.sph.umich.edu/gotcloud/ref/h37-db135-v3.tgz</b> | | <b>wget ftp://anonymous@share.sph.umich.edu/gotcloud/ref/h37-db135-v3.tgz</b> |
| <b>tar xzf h37-db135-v3.tgz</b> | | <b>tar xzf h37-db135-v3.tgz</b> |
| <b>rm -f h37-db135-v3.tgz</b> | | <b>rm -f h37-db135-v3.tgz</b> |
− | <li>Human reference 37, dbsnp 142:</li> | + | <li><div id="h37-db142">Human reference 37, dbsnp 142:</div></li> |
| <b>wget ftp://anonymous@share.sph.umich.edu/gotcloud/ref/h37-db142-v1.tgz</b> | | <b>wget ftp://anonymous@share.sph.umich.edu/gotcloud/ref/h37-db142-v1.tgz</b> |
| <b>tar xzf h37-db142-v1.tgz</b> | | <b>tar xzf h37-db142-v1.tgz</b> |
| <b>rm -f h37-db142-v1.tgz</b> | | <b>rm -f h37-db142-v1.tgz</b> |
− | <li>Human reference 37 with decoy, dbsnp 142:</li> | + | <li><div id="hs37d5-db142">Human reference 37 with decoy, dbsnp 142:</div></li> |
| <b>wget ftp://anonymous@share.sph.umich.edu/gotcloud/ref/hs37d5-db142-v1.tgz</b> | | <b>wget ftp://anonymous@share.sph.umich.edu/gotcloud/ref/hs37d5-db142-v1.tgz</b> |
| <b>tar xzf hs37d5-db142-v1.tgz</b> | | <b>tar xzf hs37d5-db142-v1.tgz</b> |
| <b>rm -f hs37d5-db142-v1.tgz</b> | | <b>rm -f hs37d5-db142-v1.tgz</b> |
| </ul> | | </ul> |