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Revision as of 10:11, 19 February 2013
, 10:11, 19 February 2013no edit summary
<b>cd /usr/local/gotcloud.ref</b>
<b>cd /usr/local/gotcloud.ref</b>
<b>tar xzvf hs37-db132.tar.gz</b>
<b>tar xzvf hs37-db132.tar.gz</b>
ref/
ref/hs37d5.fa.fai
ref/metabochip.batch2.broken.b37.chr2.plink.MAF01.bed
ref/hs37d5-bs.umfa
ref/metabochip.batch2.broken.b37.chr2.plink.MAF01.fam
ref/dbsnp_132.b37.vcf.gz.tbi
ref/dbsnp_132.UCSC.coordinates.tbl
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<b>rm -f hs37-db132.tar.gz</b>
<b>rm -f hs37-db132.tar.gz</b>
</code>
</code>
Note this path as you will need to set the variable REF_DIR in the configuration file or options
Note this path as you will need to set the variable '''REF_DIR''' in the configuration file or options
gen_biopipeline.pl and umake.
'''gen_biopipeline.pl''' and '''umake.pl'''.
