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Under the split/chrXX directory, there should be:
 
Under the split/chrXX directory, there should be:
 
* chrXX.filtered.PASS.split.[N].vcf.gz
 
* chrXX.filtered.PASS.split.[N].vcf.gz
* chr20.filtered.PASS.split.err
+
* chrXX.filtered.PASS.split.err
* chr20.filtered.PASS.split.vcflist
+
* chrXX.filtered.PASS.split.vcflist
* chr20.filtered.PASS.gz
+
* chrXX.filtered.PASS.gz
 
* subset.OK
 
* subset.OK

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