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Revision as of 14:52, 21 March 2013
, 14:52, 21 March 2013→Variant Calling Pipeline
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The Variant Calling Pipeline (UMAKE) takes recalibrated BAM files and detects SNPs and calls their genotypes, producing VCF files.
The Variant Calling Pipeline (previously called 'UMAKE') makes genotype calls from recalibrated BAM files. These genotype calls are output into [http://www.1000genomes.org/wiki/Analysis/Variant%20Call%20Format/vcf-variant-call-format-version-41 VCF (Variant Call Format) files].
