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60 bytes added
, 17:59, 26 April 2010
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− | === <strong>Optional Input files</strong><br> ==== | + | === <strong>Optional Input files</strong><br> === |
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− | ==== External/reference (e.g., HapMap) input files (snp and haplotype files) are optional. ==== | + | ==== External/reference files ==== |
− | Mach 1.0 accepts two different formats: MACH format or HapMap format. <br> | + | External/reference (e.g., HapMap) input files (snp and haplotype files) are optional. Mach 1.0 accepts two different formats: MACH format or HapMap format. <br> |
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− | MACH format SNP File | + | ===== MACH format SNP File ===== |
| --------------------------- | | --------------------------- |
| One line per SNP and one field (marker name) only. | | One line per SNP and one field (marker name) only. |
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| ... | | ... |
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− | MACH format Haplotype File | + | ===== MACH format Haplotype File ===== |
| --------------------------------- | | --------------------------------- |
| One line per haplotype. <br> | | One line per haplotype. <br> |
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| ... | | ... |
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− | HapMap format files can be downloaded from: | + | ===== HapMap format files can be downloaded from: ===== |
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| http://hapmap.org/downloads/phasing/2006-07_phaseII/phased/ | | http://hapmap.org/downloads/phasing/2006-07_phaseII/phased/ |