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, 10:24, 4 June 2010
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| For compatibility with older applications that only accept integer allele codes in pedigree files, MaCH can accept pedigree files that encode bases A, C, G, T as 1, 2, 3, 4. Here is an example: | | For compatibility with older applications that only accept integer allele codes in pedigree files, MaCH can accept pedigree files that encode bases A, C, G, T as 1, 2, 3, 4. Here is an example: |
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− | '''<Example of a pedigree file with numerically coded alleles>''' | + | '''<Example of a pedigree file with numerically coded alleles>''' |
− | FAM1001 ID1234 0 0 M 1 1 1 2 2 2 | + | FAM1001 ID1234 0 0 M 1 1 1 2 2 2 |
− | FAM1002 ID5678 0 0 F 1 2 2 2 3 3 | + | FAM1002 ID5678 0 0 F 1 2 2 2 3 3 |
− | ... | + | ... |
− | '''<End of pedigree file>''' | + | '''<End of pedigree file>''' |
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| The corresponding base-pair coded pedigree would be: | | The corresponding base-pair coded pedigree would be: |
| + | |
| + | '''<Example of a pedigree file with base-pair coded alleles>''' |
| + | FAM1001 ID1234 0 0 M A A A C C C |
| + | FAM1002 ID5678 0 0 F A C C C G G |
| + | ... |
| + | '''<End of pedigree file>''' |