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, 17:38, 15 January 2012
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| *First, find the first and last SNP in the region you are interested in. Say "rsFIRST" and "rsLAST", defined according to position. | | *First, find the first and last SNP in the region you are interested in. Say "rsFIRST" and "rsLAST", defined according to position. |
| *Then, under csh: | | *Then, under csh: |
− | @ first = `grep -nw rsFIRST orig.snps | cut -f1 -d ':'`
| + | @ first = `grep -nw rsFIRST orig.snps | cut -f1 -d ':'` |
| @ last = `grep -nw rsLAST orig.snps | cut -f1 -d ':'` | | @ last = `grep -nw rsLAST orig.snps | cut -f1 -d ':'` |
| under bash: | | under bash: |
− | first=`grep -nw rsFIRST orig.snps | cut -f1 -d ':'`
| + | first=`grep -nw rsFIRST orig.snps | cut -f1 -d ':'` |
| last=`grep -nw rsLAST orig.snps | cut -f1 -d ':'` | | last=`grep -nw rsLAST orig.snps | cut -f1 -d ':'` |
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