Difference between revisions of "Main Page"
From Genome Analysis Wiki
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[[glfSingle]] - Variant calling for a single, deeply sequenced individual | [[glfSingle]] - Variant calling for a single, deeply sequenced individual | ||
− | [[glfTrio]] - Variant calling for a single, deeply | + | [[glfTrio]] - Variant calling for a single, deeply sequenced nuclear family with two parents and one child |
[[glfMultiples]] -- Variant calling for multiple, unrelated individuals | [[glfMultiples]] -- Variant calling for multiple, unrelated individuals |
Revision as of 02:10, 15 November 2009
Abecasis Group Wiki
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Welcome!
Welcome to our brand new wiki!
For basic instructions, see the Wikipedia Tutorial.
Sequence Analysis Tools
We are developing several tools for the analysis of next generation sequence data.
Read Mapping
Karma - Our fast short read aligner
Karma-ColorSpace - QUICKSTART on mapping color space reads
Variant Calling
glfSingle - Variant calling for a single, deeply sequenced individual
glfTrio - Variant calling for a single, deeply sequenced nuclear family with two parents and one child
glfMultiples -- Variant calling for multiple, unrelated individuals