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Make file tutorial (view source)

Revision as of 21:00, 14 July 2021

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= Introduction =
 
= Introduction =
   −
GNU Make is often thought of as a tool for managing the compilation of large C programs. This is true, but it's potential is not limited to this!   
+
GNU Make is often thought of as a tool for managing the compilation of large C programs. This is true, but its potential is not limited to this!   
    
At its core, it is a generic pipelining framework that is aware of dependencies and can run steps in parallel.  
 
At its core, it is a generic pipelining framework that is aware of dependencies and can run steps in parallel.  
   −
Statistical genetics analyses often requires multiple steps to prepare the data, running computationally expensive analyses, and then collating the data.  
+
Statistical genetics analyses (or any big data analyses in general) often requires multiple steps to prepare the data, running computationally expensive analyses, and then collating the data.  
   −
Make allows you to redo part of your analyses and rerun only the parts which are affected by the change by carefully deleting indicator files.
+
Make can instead of simply compiling codes, may also execute the steps in your analyses.
 +
 
 +
Make allows you to redo part of your analyses and rerun only the parts which are affected by the change.
    
Using Make potentially save you lots of time and hair pulling especially when your supervisor asks for ALL the analyses again but this time only with rare variants.
 
Using Make potentially save you lots of time and hair pulling especially when your supervisor asks for ALL the analyses again but this time only with rare variants.
 +
 +
Using a script to generate a make file allows you to document the steps required in the analysis too and makes it easier in the future when the analysis is revisited.
 +
 +
= Basic Idea =
 +
 +
  The general format of a make file is as follows:
 +
 +
  <target> : <dependency> ...
 +
      <command 1>
 +
      <command 2>
 +
 
 +
 +
  The target is usually a small file that is created using "touch <target>". 
 +
  It can be considered as a text and in this case, it is referred via "make <target>"
 +
 
 +
  The dependency(ies) are files.
 +
 +
  The commands are single line commands in linux. 
 +
  The last command is the touch command usually. 
 +
  This allows the creation of a file to signify that the prior commands were executed successfully.
 +
 
 +
 +
  A perl script is written to generate the make file,  in this script, you may document the analyses and
 +
  allow options to customize the variables in your analyses.
 +
 +
  Once the make file is generated, you can run it with make using the -j option for parallelization.
 +
 +
  If a part of the analyses has to be re performed, simply delete the relevant target file, make will
 +
  rerun the analyses and redo steps that occur after that particular step. 
 +
 +
  Some other useful options in Make are -k for running the analyses as far as possible without
 +
  terminating the entire pipeline and -t for generating all the target files chronologically.
 +
 +
  For commands that involves a series of pipes, you can use "set pipefail" in a bash environment
 +
  to ensure that the an error is returned if any stage of the pipe fails.  If this is not done, the return
 +
  code of the last process in the pipe will be returned and Make will think that this series of commands
 +
  has completed successfully.
    
= Example =
 
= Example =
Line 238: Line 277:  
</source>
 
</source>
   −
= Solution =
     −
Makefiles are more than just tools for compiling programs. The dependency structure of a makefile
+
= Generated Makefile =
−
allows one to run and rerun an analysis pipeline in a convenient fashion.
+
 
 +
<source lang=css>
 +
.DELETE_ON_ERROR:
 +
 
 +
all: /net/fantasia/home/atks/makefile_tutorial/1.OK /net/fantasia/home/atks/makefile_tutorial/2.OK /net/fantasia/home/atks/makefile_tutorial/3.OK /net/fantasia/home/atks/makefile_tutorial/4.OK /net/fantasia/home/atks/makefile_tutorial/5.OK /net/fantasia/home/atks/makefile_tutorial/6.OK /net/fantasia/home/atks/makefile_tutorial/7.OK /net/fantasia/home/atks/makefile_tutorial/8.OK /net/fantasia/home/atks/makefile_tutorial/9.OK /net/fantasia/home/atks/makefile_tutorial/10.OK /net/fantasia/home/atks/makefile_tutorial/11.OK /net/fantasia/home/atks/makefile_tutorial/12.OK /net/fantasia/home/atks/makefile_tutorial/13.OK /net/fantasia/home/atks/makefile_tutorial/14.OK /net/fantasia/home/atks/makefile_tutorial/15.OK /net/fantasia/home/atks/makefile_tutorial/16.OK /net/fantasia/home/atks/makefile_tutorial/17.OK /net/fantasia/home/atks/makefile_tutorial/18.OK /net/fantasia/home/atks/makefile_tutorial/19.OK /net/fantasia/home/atks/makefile_tutorial/20.OK /net/fantasia/home/atks/makefile_tutorial/21.OK /net/fantasia/home/atks/makefile_tutorial/22.OK /net/fantasia/home/atks/makefile_tutorial/23.OK /net/fantasia/home/atks/makefile_tutorial/24.OK /net/fantasia/home/atks/makefile_tutorial/25.OK /net/fantasia/home/atks/makefile_tutorial/26.OK /net/fantasia/home/atks/makefile_tutorial/27.OK /net/fantasia/home/atks/makefile_tutorial/28.OK /net/fantasia/home/atks/makefile_tutorial/29.OK /net/fantasia/home/atks/makefile_tutorial/30.OK /net/fantasia/home/atks/makefile_tutorial/31.OK /net/fantasia/home/atks/makefile_tutorial/32.OK /net/fantasia/home/atks/makefile_tutorial/33.OK /net/fantasia/home/atks/makefile_tutorial/34.OK /net/fantasia/home/atks/makefile_tutorial/35.OK /net/fantasia/home/atks/makefile_tutorial/36.OK /net/fantasia/home/atks/makefile_tutorial/37.OK /net/fantasia/home/atks/makefile_tutorial/38.OK /net/fantasia/home/atks/makefile_tutorial/39.OK /net/fantasia/home/atks/makefile_tutorial/40.OK /net/fantasia/home/atks/makefile_tutorial/41.OK /net/fantasia/home/atks/makefile_tutorial/42.OK /net/fantasia/home/atks/makefile_tutorial/43.OK /net/fantasia/home/atks/makefile_tutorial/44.OK /net/fantasia/home/atks/makefile_tutorial/45.OK /net/fantasia/home/atks/makefile_tutorial/46.OK /net/fantasia/home/atks/makefile_tutorial/47.OK /net/fantasia/home/atks/makefile_tutorial/48.OK /net/fantasia/home/atks/makefile_tutorial/49.OK /net/fantasia/home/atks/makefile_tutorial/50.OK /net/fantasia/home/atks/makefile_tutorial/51.OK /net/fantasia/home/atks/makefile_tutorial/52.OK /net/fantasia/home/atks/makefile_tutorial/53.OK /net/fantasia/home/atks/makefile_tutorial/54.OK /net/fantasia/home/atks/makefile_tutorial/55.OK /net/fantasia/home/atks/makefile_tutorial/56.OK /net/fantasia/home/atks/makefile_tutorial/57.OK /net/fantasia/home/atks/makefile_tutorial/58.OK /net/fantasia/home/atks/makefile_tutorial/59.OK /net/fantasia/home/atks/makefile_tutorial/60.OK /net/fantasia/home/atks/makefile_tutorial/61.OK /net/fantasia/home/atks/makefile_tutorial/62.OK /net/fantasia/home/atks/makefile_tutorial/63.OK /net/fantasia/home/atks/makefile_tutorial/64.OK /net/fantasia/home/atks/makefile_tutorial/65.OK /net/fantasia/home/atks/makefile_tutorial/66.OK /net/fantasia/home/atks/makefile_tutorial/67.OK /net/fantasia/home/atks/makefile_tutorial/68.OK /net/fantasia/home/atks/makefile_tutorial/69.OK /net/fantasia/home/atks/makefile_tutorial/70.OK /net/fantasia/home/atks/makefile_tutorial/71.OK /net/fantasia/home/atks/makefile_tutorial/72.OK /net/fantasia/home/atks/makefile_tutorial/73.OK /net/fantasia/home/atks/makefile_tutorial/74.OK /net/fantasia/home/atks/makefile_tutorial/75.OK /net/fantasia/home/atks/makefile_tutorial/76.OK /net/fantasia/home/atks/makefile_tutorial/77.OK /net/fantasia/home/atks/makefile_tutorial/78.OK /net/fantasia/home/atks/makefile_tutorial/79.OK /net/fantasia/home/atks/makefile_tutorial/80.OK /net/fantasia/home/atks/makefile_tutorial/81.OK /net/fantasia/home/atks/makefile_tutorial/82.OK /net/fantasia/home/atks/makefile_tutorial/83.OK /net/fantasia/home/atks/makefile_tutorial/84.OK /net/fantasia/home/atks/makefile_tutorial/85.OK /net/fantasia/home/atks/makefile_tutorial/86.OK /net/fantasia/home/atks/makefile_tutorial/87.OK /net/fantasia/home/atks/makefile_tutorial/88.OK /net/fantasia/home/atks/makefile_tutorial/89.OK /net/fantasia/home/atks/makefile_tutorial/90.OK /net/fantasia/home/atks/makefile_tutorial/91.OK /net/fantasia/home/atks/makefile_tutorial/92.OK /net/fantasia/home/atks/makefile_tutorial/93.OK /net/fantasia/home/atks/makefile_tutorial/94.OK /net/fantasia/home/atks/makefile_tutorial/95.OK /net/fantasia/home/atks/makefile_tutorial/96.OK /net/fantasia/home/atks/makefile_tutorial/97.OK /net/fantasia/home/atks/makefile_tutorial/98.OK /net/fantasia/home/atks/makefile_tutorial/99.OK /net/fantasia/home/atks/makefile_tutorial/100.OK /net/fantasia/home/atks/makefile_tutorial/all.log.OK /net/fantasia/home/atks/makefile_tutorial/cleaned.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/1.OK:
 +
srun echo 1 > /net/fantasia/home/atks/makefile_tutorial/1.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/1.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/2.OK:
 +
srun echo 2 > /net/fantasia/home/atks/makefile_tutorial/2.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/2.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/3.OK:
 +
srun echo 3 > /net/fantasia/home/atks/makefile_tutorial/3.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/3.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/4.OK:
 +
srun echo 4 > /net/fantasia/home/atks/makefile_tutorial/4.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/4.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/5.OK:
 +
srun echo 5 > /net/fantasia/home/atks/makefile_tutorial/5.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/5.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/6.OK:
 +
srun echo 6 > /net/fantasia/home/atks/makefile_tutorial/6.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/6.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/7.OK:
 +
srun echo 7 > /net/fantasia/home/atks/makefile_tutorial/7.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/7.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/8.OK:
 +
srun echo 8 > /net/fantasia/home/atks/makefile_tutorial/8.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/8.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/9.OK:
 +
srun echo 9 > /net/fantasia/home/atks/makefile_tutorial/9.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/9.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/10.OK:
 +
srun echo 10 > /net/fantasia/home/atks/makefile_tutorial/10.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/10.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/11.OK:
 +
srun echo 11 > /net/fantasia/home/atks/makefile_tutorial/11.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/11.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/12.OK:
 +
srun echo 12 > /net/fantasia/home/atks/makefile_tutorial/12.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/12.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/13.OK:
 +
srun echo 13 > /net/fantasia/home/atks/makefile_tutorial/13.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/13.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/14.OK:
 +
srun echo 14 > /net/fantasia/home/atks/makefile_tutorial/14.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/14.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/15.OK:
 +
srun echo 15 > /net/fantasia/home/atks/makefile_tutorial/15.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/15.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/16.OK:
 +
srun echo 16 > /net/fantasia/home/atks/makefile_tutorial/16.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/16.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/17.OK:
 +
srun echo 17 > /net/fantasia/home/atks/makefile_tutorial/17.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/17.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/18.OK:
 +
srun echo 18 > /net/fantasia/home/atks/makefile_tutorial/18.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/18.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/19.OK:
 +
srun echo 19 > /net/fantasia/home/atks/makefile_tutorial/19.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/19.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/20.OK:
 +
srun echo 20 > /net/fantasia/home/atks/makefile_tutorial/20.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/20.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/21.OK:
 +
srun echo 21 > /net/fantasia/home/atks/makefile_tutorial/21.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/21.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/22.OK:
 +
srun echo 22 > /net/fantasia/home/atks/makefile_tutorial/22.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/22.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/23.OK:
 +
srun echo 23 > /net/fantasia/home/atks/makefile_tutorial/23.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/23.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/24.OK:
 +
srun echo 24 > /net/fantasia/home/atks/makefile_tutorial/24.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/24.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/25.OK:
 +
srun echo 25 > /net/fantasia/home/atks/makefile_tutorial/25.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/25.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/26.OK:
 +
srun echo 26 > /net/fantasia/home/atks/makefile_tutorial/26.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/26.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/27.OK:
 +
srun echo 27 > /net/fantasia/home/atks/makefile_tutorial/27.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/27.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/28.OK:
 +
srun echo 28 > /net/fantasia/home/atks/makefile_tutorial/28.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/28.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/29.OK:
 +
srun echo 29 > /net/fantasia/home/atks/makefile_tutorial/29.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/29.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/30.OK:
 +
srun echo 30 > /net/fantasia/home/atks/makefile_tutorial/30.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/30.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/31.OK:
 +
srun echo 31 > /net/fantasia/home/atks/makefile_tutorial/31.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/31.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/32.OK:
 +
srun echo 32 > /net/fantasia/home/atks/makefile_tutorial/32.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/32.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/33.OK:
 +
srun echo 33 > /net/fantasia/home/atks/makefile_tutorial/33.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/33.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/34.OK:
 +
srun echo 34 > /net/fantasia/home/atks/makefile_tutorial/34.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/34.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/35.OK:
 +
srun echo 35 > /net/fantasia/home/atks/makefile_tutorial/35.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/35.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/36.OK:
 +
srun echo 36 > /net/fantasia/home/atks/makefile_tutorial/36.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/36.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/37.OK:
 +
srun echo 37 > /net/fantasia/home/atks/makefile_tutorial/37.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/37.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/38.OK:
 +
srun echo 38 > /net/fantasia/home/atks/makefile_tutorial/38.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/38.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/39.OK:
 +
srun echo 39 > /net/fantasia/home/atks/makefile_tutorial/39.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/39.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/40.OK:
 +
srun echo 40 > /net/fantasia/home/atks/makefile_tutorial/40.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/40.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/41.OK:
 +
srun echo 41 > /net/fantasia/home/atks/makefile_tutorial/41.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/41.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/42.OK:
 +
srun echo 42 > /net/fantasia/home/atks/makefile_tutorial/42.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/42.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/43.OK:
 +
srun echo 43 > /net/fantasia/home/atks/makefile_tutorial/43.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/43.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/44.OK:
 +
srun echo 44 > /net/fantasia/home/atks/makefile_tutorial/44.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/44.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/45.OK:
 +
srun echo 45 > /net/fantasia/home/atks/makefile_tutorial/45.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/45.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/46.OK:
 +
srun echo 46 > /net/fantasia/home/atks/makefile_tutorial/46.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/46.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/47.OK:
 +
srun echo 47 > /net/fantasia/home/atks/makefile_tutorial/47.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/47.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/48.OK:
 +
srun echo 48 > /net/fantasia/home/atks/makefile_tutorial/48.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/48.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/49.OK:
 +
srun echo 49 > /net/fantasia/home/atks/makefile_tutorial/49.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/49.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/50.OK:
 +
srun echo 50 > /net/fantasia/home/atks/makefile_tutorial/50.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/50.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/51.OK:
 +
srun echo 51 > /net/fantasia/home/atks/makefile_tutorial/51.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/51.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/52.OK:
 +
srun echo 52 > /net/fantasia/home/atks/makefile_tutorial/52.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/52.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/53.OK:
 +
srun echo 53 > /net/fantasia/home/atks/makefile_tutorial/53.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/53.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/54.OK:
 +
srun echo 54 > /net/fantasia/home/atks/makefile_tutorial/54.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/54.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/55.OK:
 +
srun echo 55 > /net/fantasia/home/atks/makefile_tutorial/55.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/55.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/56.OK:
 +
srun echo 56 > /net/fantasia/home/atks/makefile_tutorial/56.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/56.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/57.OK:
 +
srun echo 57 > /net/fantasia/home/atks/makefile_tutorial/57.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/57.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/58.OK:
 +
srun echo 58 > /net/fantasia/home/atks/makefile_tutorial/58.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/58.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/59.OK:
 +
srun echo 59 > /net/fantasia/home/atks/makefile_tutorial/59.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/59.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/60.OK:
 +
srun echo 60 > /net/fantasia/home/atks/makefile_tutorial/60.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/60.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/61.OK:
 +
srun echo 61 > /net/fantasia/home/atks/makefile_tutorial/61.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/61.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/62.OK:
 +
srun echo 62 > /net/fantasia/home/atks/makefile_tutorial/62.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/62.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/63.OK:
 +
srun echo 63 > /net/fantasia/home/atks/makefile_tutorial/63.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/63.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/64.OK:
 +
srun echo 64 > /net/fantasia/home/atks/makefile_tutorial/64.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/64.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/65.OK:
 +
srun echo 65 > /net/fantasia/home/atks/makefile_tutorial/65.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/65.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/66.OK:
 +
srun echo 66 > /net/fantasia/home/atks/makefile_tutorial/66.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/66.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/67.OK:
 +
srun echo 67 > /net/fantasia/home/atks/makefile_tutorial/67.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/67.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/68.OK:
 +
srun echo 68 > /net/fantasia/home/atks/makefile_tutorial/68.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/68.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/69.OK:
 +
srun echo 69 > /net/fantasia/home/atks/makefile_tutorial/69.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/69.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/70.OK:
 +
srun echo 70 > /net/fantasia/home/atks/makefile_tutorial/70.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/70.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/71.OK:
 +
srun echo 71 > /net/fantasia/home/atks/makefile_tutorial/71.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/71.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/72.OK:
 +
srun echo 72 > /net/fantasia/home/atks/makefile_tutorial/72.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/72.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/73.OK:
 +
srun echo 73 > /net/fantasia/home/atks/makefile_tutorial/73.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/73.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/74.OK:
 +
srun echo 74 > /net/fantasia/home/atks/makefile_tutorial/74.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/74.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/75.OK:
 +
srun echo 75 > /net/fantasia/home/atks/makefile_tutorial/75.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/75.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/76.OK:
 +
srun echo 76 > /net/fantasia/home/atks/makefile_tutorial/76.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/76.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/77.OK:
 +
srun echo 77 > /net/fantasia/home/atks/makefile_tutorial/77.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/77.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/78.OK:
 +
srun echo 78 > /net/fantasia/home/atks/makefile_tutorial/78.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/78.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/79.OK:
 +
srun echo 79 > /net/fantasia/home/atks/makefile_tutorial/79.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/79.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/80.OK:
 +
srun echo 80 > /net/fantasia/home/atks/makefile_tutorial/80.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/80.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/81.OK:
 +
srun echo 81 > /net/fantasia/home/atks/makefile_tutorial/81.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/81.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/82.OK:
 +
srun echo 82 > /net/fantasia/home/atks/makefile_tutorial/82.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/82.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/83.OK:
 +
srun echo 83 > /net/fantasia/home/atks/makefile_tutorial/83.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/83.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/84.OK:
 +
srun echo 84 > /net/fantasia/home/atks/makefile_tutorial/84.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/84.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/85.OK:
 +
srun echo 85 > /net/fantasia/home/atks/makefile_tutorial/85.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/85.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/86.OK:
 +
srun echo 86 > /net/fantasia/home/atks/makefile_tutorial/86.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/86.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/87.OK:
 +
srun echo 87 > /net/fantasia/home/atks/makefile_tutorial/87.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/87.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/88.OK:
 +
srun echo 88 > /net/fantasia/home/atks/makefile_tutorial/88.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/88.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/89.OK:
 +
srun echo 89 > /net/fantasia/home/atks/makefile_tutorial/89.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/89.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/90.OK:
 +
srun echo 90 > /net/fantasia/home/atks/makefile_tutorial/90.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/90.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/91.OK:
 +
srun echo 91 > /net/fantasia/home/atks/makefile_tutorial/91.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/91.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/92.OK:
 +
srun echo 92 > /net/fantasia/home/atks/makefile_tutorial/92.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/92.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/93.OK:
 +
srun echo 93 > /net/fantasia/home/atks/makefile_tutorial/93.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/93.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/94.OK:
 +
srun echo 94 > /net/fantasia/home/atks/makefile_tutorial/94.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/94.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/95.OK:
 +
srun echo 95 > /net/fantasia/home/atks/makefile_tutorial/95.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/95.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/96.OK:
 +
srun echo 96 > /net/fantasia/home/atks/makefile_tutorial/96.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/96.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/97.OK:
 +
srun echo 97 > /net/fantasia/home/atks/makefile_tutorial/97.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/97.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/98.OK:
 +
srun echo 98 > /net/fantasia/home/atks/makefile_tutorial/98.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/98.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/99.OK:
 +
srun echo 99 > /net/fantasia/home/atks/makefile_tutorial/99.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/99.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/100.OK:
 +
srun echo 100 > /net/fantasia/home/atks/makefile_tutorial/100.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/100.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/all.log.OK:  /net/fantasia/home/atks/makefile_tutorial/1.OK /net/fantasia/home/atks/makefile_tutorial/2.OK /net/fantasia/home/atks/makefile_tutorial/3.OK /net/fantasia/home/atks/makefile_tutorial/4.OK /net/fantasia/home/atks/makefile_tutorial/5.OK /net/fantasia/home/atks/makefile_tutorial/6.OK /net/fantasia/home/atks/makefile_tutorial/7.OK /net/fantasia/home/atks/makefile_tutorial/8.OK /net/fantasia/home/atks/makefile_tutorial/9.OK /net/fantasia/home/atks/makefile_tutorial/10.OK /net/fantasia/home/atks/makefile_tutorial/11.OK /net/fantasia/home/atks/makefile_tutorial/12.OK /net/fantasia/home/atks/makefile_tutorial/13.OK /net/fantasia/home/atks/makefile_tutorial/14.OK /net/fantasia/home/atks/makefile_tutorial/15.OK /net/fantasia/home/atks/makefile_tutorial/16.OK /net/fantasia/home/atks/makefile_tutorial/17.OK /net/fantasia/home/atks/makefile_tutorial/18.OK /net/fantasia/home/atks/makefile_tutorial/19.OK /net/fantasia/home/atks/makefile_tutorial/20.OK /net/fantasia/home/atks/makefile_tutorial/21.OK /net/fantasia/home/atks/makefile_tutorial/22.OK /net/fantasia/home/atks/makefile_tutorial/23.OK /net/fantasia/home/atks/makefile_tutorial/24.OK /net/fantasia/home/atks/makefile_tutorial/25.OK /net/fantasia/home/atks/makefile_tutorial/26.OK /net/fantasia/home/atks/makefile_tutorial/27.OK /net/fantasia/home/atks/makefile_tutorial/28.OK /net/fantasia/home/atks/makefile_tutorial/29.OK /net/fantasia/home/atks/makefile_tutorial/30.OK /net/fantasia/home/atks/makefile_tutorial/31.OK /net/fantasia/home/atks/makefile_tutorial/32.OK /net/fantasia/home/atks/makefile_tutorial/33.OK /net/fantasia/home/atks/makefile_tutorial/34.OK /net/fantasia/home/atks/makefile_tutorial/35.OK /net/fantasia/home/atks/makefile_tutorial/36.OK /net/fantasia/home/atks/makefile_tutorial/37.OK /net/fantasia/home/atks/makefile_tutorial/38.OK /net/fantasia/home/atks/makefile_tutorial/39.OK /net/fantasia/home/atks/makefile_tutorial/40.OK /net/fantasia/home/atks/makefile_tutorial/41.OK /net/fantasia/home/atks/makefile_tutorial/42.OK /net/fantasia/home/atks/makefile_tutorial/43.OK /net/fantasia/home/atks/makefile_tutorial/44.OK /net/fantasia/home/atks/makefile_tutorial/45.OK /net/fantasia/home/atks/makefile_tutorial/46.OK /net/fantasia/home/atks/makefile_tutorial/47.OK /net/fantasia/home/atks/makefile_tutorial/48.OK /net/fantasia/home/atks/makefile_tutorial/49.OK /net/fantasia/home/atks/makefile_tutorial/50.OK /net/fantasia/home/atks/makefile_tutorial/51.OK /net/fantasia/home/atks/makefile_tutorial/52.OK /net/fantasia/home/atks/makefile_tutorial/53.OK /net/fantasia/home/atks/makefile_tutorial/54.OK /net/fantasia/home/atks/makefile_tutorial/55.OK /net/fantasia/home/atks/makefile_tutorial/56.OK /net/fantasia/home/atks/makefile_tutorial/57.OK /net/fantasia/home/atks/makefile_tutorial/58.OK /net/fantasia/home/atks/makefile_tutorial/59.OK /net/fantasia/home/atks/makefile_tutorial/60.OK /net/fantasia/home/atks/makefile_tutorial/61.OK /net/fantasia/home/atks/makefile_tutorial/62.OK /net/fantasia/home/atks/makefile_tutorial/63.OK /net/fantasia/home/atks/makefile_tutorial/64.OK /net/fantasia/home/atks/makefile_tutorial/65.OK /net/fantasia/home/atks/makefile_tutorial/66.OK /net/fantasia/home/atks/makefile_tutorial/67.OK /net/fantasia/home/atks/makefile_tutorial/68.OK /net/fantasia/home/atks/makefile_tutorial/69.OK /net/fantasia/home/atks/makefile_tutorial/70.OK /net/fantasia/home/atks/makefile_tutorial/71.OK /net/fantasia/home/atks/makefile_tutorial/72.OK /net/fantasia/home/atks/makefile_tutorial/73.OK /net/fantasia/home/atks/makefile_tutorial/74.OK /net/fantasia/home/atks/makefile_tutorial/75.OK /net/fantasia/home/atks/makefile_tutorial/76.OK /net/fantasia/home/atks/makefile_tutorial/77.OK /net/fantasia/home/atks/makefile_tutorial/78.OK /net/fantasia/home/atks/makefile_tutorial/79.OK /net/fantasia/home/atks/makefile_tutorial/80.OK /net/fantasia/home/atks/makefile_tutorial/81.OK /net/fantasia/home/atks/makefile_tutorial/82.OK /net/fantasia/home/atks/makefile_tutorial/83.OK /net/fantasia/home/atks/makefile_tutorial/84.OK /net/fantasia/home/atks/makefile_tutorial/85.OK /net/fantasia/home/atks/makefile_tutorial/86.OK /net/fantasia/home/atks/makefile_tutorial/87.OK /net/fantasia/home/atks/makefile_tutorial/88.OK /net/fantasia/home/atks/makefile_tutorial/89.OK /net/fantasia/home/atks/makefile_tutorial/90.OK /net/fantasia/home/atks/makefile_tutorial/91.OK /net/fantasia/home/atks/makefile_tutorial/92.OK /net/fantasia/home/atks/makefile_tutorial/93.OK /net/fantasia/home/atks/makefile_tutorial/94.OK /net/fantasia/home/atks/makefile_tutorial/95.OK /net/fantasia/home/atks/makefile_tutorial/96.OK /net/fantasia/home/atks/makefile_tutorial/97.OK /net/fantasia/home/atks/makefile_tutorial/98.OK /net/fantasia/home/atks/makefile_tutorial/99.OK /net/fantasia/home/atks/makefile_tutorial/100.OK
 +
srun cat  /net/fantasia/home/atks/makefile_tutorial/1.log /net/fantasia/home/atks/makefile_tutorial/2.log /net/fantasia/home/atks/makefile_tutorial/3.log /net/fantasia/home/atks/makefile_tutorial/4.log /net/fantasia/home/atks/makefile_tutorial/5.log /net/fantasia/home/atks/makefile_tutorial/6.log /net/fantasia/home/atks/makefile_tutorial/7.log /net/fantasia/home/atks/makefile_tutorial/8.log /net/fantasia/home/atks/makefile_tutorial/9.log /net/fantasia/home/atks/makefile_tutorial/10.log /net/fantasia/home/atks/makefile_tutorial/11.log /net/fantasia/home/atks/makefile_tutorial/12.log /net/fantasia/home/atks/makefile_tutorial/13.log /net/fantasia/home/atks/makefile_tutorial/14.log /net/fantasia/home/atks/makefile_tutorial/15.log /net/fantasia/home/atks/makefile_tutorial/16.log /net/fantasia/home/atks/makefile_tutorial/17.log /net/fantasia/home/atks/makefile_tutorial/18.log /net/fantasia/home/atks/makefile_tutorial/19.log /net/fantasia/home/atks/makefile_tutorial/20.log /net/fantasia/home/atks/makefile_tutorial/21.log /net/fantasia/home/atks/makefile_tutorial/22.log /net/fantasia/home/atks/makefile_tutorial/23.log /net/fantasia/home/atks/makefile_tutorial/24.log /net/fantasia/home/atks/makefile_tutorial/25.log /net/fantasia/home/atks/makefile_tutorial/26.log /net/fantasia/home/atks/makefile_tutorial/27.log /net/fantasia/home/atks/makefile_tutorial/28.log /net/fantasia/home/atks/makefile_tutorial/29.log /net/fantasia/home/atks/makefile_tutorial/30.log /net/fantasia/home/atks/makefile_tutorial/31.log /net/fantasia/home/atks/makefile_tutorial/32.log /net/fantasia/home/atks/makefile_tutorial/33.log /net/fantasia/home/atks/makefile_tutorial/34.log /net/fantasia/home/atks/makefile_tutorial/35.log /net/fantasia/home/atks/makefile_tutorial/36.log /net/fantasia/home/atks/makefile_tutorial/37.log /net/fantasia/home/atks/makefile_tutorial/38.log /net/fantasia/home/atks/makefile_tutorial/39.log /net/fantasia/home/atks/makefile_tutorial/40.log /net/fantasia/home/atks/makefile_tutorial/41.log /net/fantasia/home/atks/makefile_tutorial/42.log /net/fantasia/home/atks/makefile_tutorial/43.log /net/fantasia/home/atks/makefile_tutorial/44.log /net/fantasia/home/atks/makefile_tutorial/45.log /net/fantasia/home/atks/makefile_tutorial/46.log /net/fantasia/home/atks/makefile_tutorial/47.log /net/fantasia/home/atks/makefile_tutorial/48.log /net/fantasia/home/atks/makefile_tutorial/49.log /net/fantasia/home/atks/makefile_tutorial/50.log /net/fantasia/home/atks/makefile_tutorial/51.log /net/fantasia/home/atks/makefile_tutorial/52.log /net/fantasia/home/atks/makefile_tutorial/53.log /net/fantasia/home/atks/makefile_tutorial/54.log /net/fantasia/home/atks/makefile_tutorial/55.log /net/fantasia/home/atks/makefile_tutorial/56.log /net/fantasia/home/atks/makefile_tutorial/57.log /net/fantasia/home/atks/makefile_tutorial/58.log /net/fantasia/home/atks/makefile_tutorial/59.log /net/fantasia/home/atks/makefile_tutorial/60.log /net/fantasia/home/atks/makefile_tutorial/61.log /net/fantasia/home/atks/makefile_tutorial/62.log /net/fantasia/home/atks/makefile_tutorial/63.log /net/fantasia/home/atks/makefile_tutorial/64.log /net/fantasia/home/atks/makefile_tutorial/65.log /net/fantasia/home/atks/makefile_tutorial/66.log /net/fantasia/home/atks/makefile_tutorial/67.log /net/fantasia/home/atks/makefile_tutorial/68.log /net/fantasia/home/atks/makefile_tutorial/69.log /net/fantasia/home/atks/makefile_tutorial/70.log /net/fantasia/home/atks/makefile_tutorial/71.log /net/fantasia/home/atks/makefile_tutorial/72.log /net/fantasia/home/atks/makefile_tutorial/73.log /net/fantasia/home/atks/makefile_tutorial/74.log /net/fantasia/home/atks/makefile_tutorial/75.log /net/fantasia/home/atks/makefile_tutorial/76.log /net/fantasia/home/atks/makefile_tutorial/77.log /net/fantasia/home/atks/makefile_tutorial/78.log /net/fantasia/home/atks/makefile_tutorial/79.log /net/fantasia/home/atks/makefile_tutorial/80.log /net/fantasia/home/atks/makefile_tutorial/81.log /net/fantasia/home/atks/makefile_tutorial/82.log /net/fantasia/home/atks/makefile_tutorial/83.log /net/fantasia/home/atks/makefile_tutorial/84.log /net/fantasia/home/atks/makefile_tutorial/85.log /net/fantasia/home/atks/makefile_tutorial/86.log /net/fantasia/home/atks/makefile_tutorial/87.log /net/fantasia/home/atks/makefile_tutorial/88.log /net/fantasia/home/atks/makefile_tutorial/89.log /net/fantasia/home/atks/makefile_tutorial/90.log /net/fantasia/home/atks/makefile_tutorial/91.log /net/fantasia/home/atks/makefile_tutorial/92.log /net/fantasia/home/atks/makefile_tutorial/93.log /net/fantasia/home/atks/makefile_tutorial/94.log /net/fantasia/home/atks/makefile_tutorial/95.log /net/fantasia/home/atks/makefile_tutorial/96.log /net/fantasia/home/atks/makefile_tutorial/97.log /net/fantasia/home/atks/makefile_tutorial/98.log /net/fantasia/home/atks/makefile_tutorial/99.log /net/fantasia/home/atks/makefile_tutorial/100.log > /net/fantasia/home/atks/makefile_tutorial/all.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/all.log.OK
 +
 
 +
/net/fantasia/home/atks/makefile_tutorial/cleaned.OK: /net/fantasia/home/atks/makefile_tutorial/all.log.OK
 +
srun rm  /net/fantasia/home/atks/makefile_tutorial/1.log /net/fantasia/home/atks/makefile_tutorial/2.log /net/fantasia/home/atks/makefile_tutorial/3.log /net/fantasia/home/atks/makefile_tutorial/4.log /net/fantasia/home/atks/makefile_tutorial/5.log /net/fantasia/home/atks/makefile_tutorial/6.log /net/fantasia/home/atks/makefile_tutorial/7.log /net/fantasia/home/atks/makefile_tutorial/8.log /net/fantasia/home/atks/makefile_tutorial/9.log /net/fantasia/home/atks/makefile_tutorial/10.log /net/fantasia/home/atks/makefile_tutorial/11.log /net/fantasia/home/atks/makefile_tutorial/12.log /net/fantasia/home/atks/makefile_tutorial/13.log /net/fantasia/home/atks/makefile_tutorial/14.log /net/fantasia/home/atks/makefile_tutorial/15.log /net/fantasia/home/atks/makefile_tutorial/16.log /net/fantasia/home/atks/makefile_tutorial/17.log /net/fantasia/home/atks/makefile_tutorial/18.log /net/fantasia/home/atks/makefile_tutorial/19.log /net/fantasia/home/atks/makefile_tutorial/20.log /net/fantasia/home/atks/makefile_tutorial/21.log /net/fantasia/home/atks/makefile_tutorial/22.log /net/fantasia/home/atks/makefile_tutorial/23.log /net/fantasia/home/atks/makefile_tutorial/24.log /net/fantasia/home/atks/makefile_tutorial/25.log /net/fantasia/home/atks/makefile_tutorial/26.log /net/fantasia/home/atks/makefile_tutorial/27.log /net/fantasia/home/atks/makefile_tutorial/28.log /net/fantasia/home/atks/makefile_tutorial/29.log /net/fantasia/home/atks/makefile_tutorial/30.log /net/fantasia/home/atks/makefile_tutorial/31.log /net/fantasia/home/atks/makefile_tutorial/32.log /net/fantasia/home/atks/makefile_tutorial/33.log /net/fantasia/home/atks/makefile_tutorial/34.log /net/fantasia/home/atks/makefile_tutorial/35.log /net/fantasia/home/atks/makefile_tutorial/36.log /net/fantasia/home/atks/makefile_tutorial/37.log /net/fantasia/home/atks/makefile_tutorial/38.log /net/fantasia/home/atks/makefile_tutorial/39.log /net/fantasia/home/atks/makefile_tutorial/40.log /net/fantasia/home/atks/makefile_tutorial/41.log /net/fantasia/home/atks/makefile_tutorial/42.log /net/fantasia/home/atks/makefile_tutorial/43.log /net/fantasia/home/atks/makefile_tutorial/44.log /net/fantasia/home/atks/makefile_tutorial/45.log /net/fantasia/home/atks/makefile_tutorial/46.log /net/fantasia/home/atks/makefile_tutorial/47.log /net/fantasia/home/atks/makefile_tutorial/48.log /net/fantasia/home/atks/makefile_tutorial/49.log /net/fantasia/home/atks/makefile_tutorial/50.log /net/fantasia/home/atks/makefile_tutorial/51.log /net/fantasia/home/atks/makefile_tutorial/52.log /net/fantasia/home/atks/makefile_tutorial/53.log /net/fantasia/home/atks/makefile_tutorial/54.log /net/fantasia/home/atks/makefile_tutorial/55.log /net/fantasia/home/atks/makefile_tutorial/56.log /net/fantasia/home/atks/makefile_tutorial/57.log /net/fantasia/home/atks/makefile_tutorial/58.log /net/fantasia/home/atks/makefile_tutorial/59.log /net/fantasia/home/atks/makefile_tutorial/60.log /net/fantasia/home/atks/makefile_tutorial/61.log /net/fantasia/home/atks/makefile_tutorial/62.log /net/fantasia/home/atks/makefile_tutorial/63.log /net/fantasia/home/atks/makefile_tutorial/64.log /net/fantasia/home/atks/makefile_tutorial/65.log /net/fantasia/home/atks/makefile_tutorial/66.log /net/fantasia/home/atks/makefile_tutorial/67.log /net/fantasia/home/atks/makefile_tutorial/68.log /net/fantasia/home/atks/makefile_tutorial/69.log /net/fantasia/home/atks/makefile_tutorial/70.log /net/fantasia/home/atks/makefile_tutorial/71.log /net/fantasia/home/atks/makefile_tutorial/72.log /net/fantasia/home/atks/makefile_tutorial/73.log /net/fantasia/home/atks/makefile_tutorial/74.log /net/fantasia/home/atks/makefile_tutorial/75.log /net/fantasia/home/atks/makefile_tutorial/76.log /net/fantasia/home/atks/makefile_tutorial/77.log /net/fantasia/home/atks/makefile_tutorial/78.log /net/fantasia/home/atks/makefile_tutorial/79.log /net/fantasia/home/atks/makefile_tutorial/80.log /net/fantasia/home/atks/makefile_tutorial/81.log /net/fantasia/home/atks/makefile_tutorial/82.log /net/fantasia/home/atks/makefile_tutorial/83.log /net/fantasia/home/atks/makefile_tutorial/84.log /net/fantasia/home/atks/makefile_tutorial/85.log /net/fantasia/home/atks/makefile_tutorial/86.log /net/fantasia/home/atks/makefile_tutorial/87.log /net/fantasia/home/atks/makefile_tutorial/88.log /net/fantasia/home/atks/makefile_tutorial/89.log /net/fantasia/home/atks/makefile_tutorial/90.log /net/fantasia/home/atks/makefile_tutorial/91.log /net/fantasia/home/atks/makefile_tutorial/92.log /net/fantasia/home/atks/makefile_tutorial/93.log /net/fantasia/home/atks/makefile_tutorial/94.log /net/fantasia/home/atks/makefile_tutorial/95.log /net/fantasia/home/atks/makefile_tutorial/96.log /net/fantasia/home/atks/makefile_tutorial/97.log /net/fantasia/home/atks/makefile_tutorial/98.log /net/fantasia/home/atks/makefile_tutorial/99.log /net/fantasia/home/atks/makefile_tutorial/100.log
 +
touch /net/fantasia/home/atks/makefile_tutorial/cleaned.OK
 +
 
 +
clean:
 +
-rm -rf /net/fantasia/home/atks/makefile_tutorial/*.OK /net/fantasia/home/atks/makefile_tutorial/*.log
 +
</source>
 +
 
 +
= Similar articles =
 +
 
 +
[http://kbroman.org/Tools4RR/pages/schedule.html Tools for reproducible research] <br>
 +
[http://bost.ocks.org/mike/make/ Why use make?] <br>
 +
[http://stackoverflow.com/questions/395234/any-interesting-uses-of-makefiles-to-share Any interesting uses of makefiles to share?] <br>
 +
[https://www.biostars.org/p/79/ How To Organize A Pipeline Of Small Scripts Together?]
 +
 
 +
= Acknowledgement =
 +
 
 +
Thanks to Hyun for introducing this trick.
 +
 
 +
= Maintained by =
   −
Makefiles themselves are not that readable if there are many dependencies. We can use a script
+
This page is maintained by  [mailto:atks@umich.edu Adrian].
−
where we can express the analysis pipeline more easily and use it to generate a Makefile.
 
Atks
1,102

edits

Retrieved from "http://genome.sph.umich.edu/wiki/Special:MobileDiff/13494...15164"

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