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A perl script is written to generate the make file, in this script, you may document the analyses and
A perl script is written to generate the make file, in this script, you may document the analyses and
allow options to customize the variables in your analyses.
allow options to customize the variables in your analyses.
Once the make file is generated, you can run it with make using the -j option for parallelization.
If a part of the analyses has to be re performed, simply delete the relevant target file, make will
rerun the analyses and redo steps that occur after that particular step.
Some other useful options in Make are -k for running the analyses as far as possible without
terminating the entire pipeline and -t for generating all the target files chronologically.
= Example =
= Example =
