Changes

                 --prefix testRun

                 --prefix testRun

Here <code>refPanel.vcf</code> is the reference panel used in VCF format (e.g. 1000 Genomes), <code>targetStudy.vcf</code> is the phased GWAS data in VCF format and <code>testRun</code> is the prefix for the output files. Some commonly used reference panels are available for download in [[#Reference Panels for Download| Reference Panels]]. See wiki page on [[Minimac3 Usage| Detailed Usage]] and [[Minimac3 Imputation Cookbook|Imputation Cookbook]] for further details on using '''Minimac3''' for imputation analysis.

Here <code>refPanel.vcf</code> is the reference panel used in VCF format (e.g. 1000 Genomes), <code>targetStudy.vcf</code> is the phased GWAS data in VCF format, and <code>testRun</code> is the prefix for the output files. Some commonly used reference panels are available for download in [[#Reference Panels for Download| Reference Panels]]. See wiki page on [[Minimac3 Usage| Detailed Usage]] and [[Minimac3 Imputation Cookbook|Imputation Cookbook]] for further details on using '''Minimac3''' for imputation analysis.

   

   

Users can always type the following for further support:

Users can always type the following for further support: