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, 00:28, 29 January 2015
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| This wiki page is designed to give users a detailed explanation on Minimac3 Usage. | | This wiki page is designed to give users a detailed explanation on Minimac3 Usage. |
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− | = Download =
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− | '''Minimac3 ''' is available as an undocumented release version. The source files are available for download here and commonly used reference panels in <code>M3VCF</code> format are available for download in [[#Reference Panels for Download | Reference Panels]].
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− | * To Download Minimac3
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− | {| class="wikitable" border="1" cellpadding="2"
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− | |- bgcolor="lightgray"
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− | ! Description
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− | ! Download Link
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− | | Minimac3 Executable
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− | | [[Media : Minimac3.v1.0.0.binary.tar.gz | UNIX Users ]]
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− | | Minimac3-omp Executable (for parallel computing)
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− | | [[Media : Minimac3.v1.0.0.binary-OMP.tar.gz | UNIX Users ]]
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− | | Minimac3 Source Files
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− | | [[Media : Minimac3.v1.0.0.tar.gz | UNIX Users ]]
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− | |}
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| = Command Line Options = | | = Command Line Options = |
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| [NOTE: If parameter estimates are found in <code>M3VCF</code> files, Minimac3 will automatically use them for imputation. Users should use handle <code>--updateModel</code> in order to update the parameter estimates using the target/gwas panel as well. However, this is NOT necessary in most cases, unless the user has strong reasons to believe that this might increase the imputation accuracy.] | | [NOTE: If parameter estimates are found in <code>M3VCF</code> files, Minimac3 will automatically use them for imputation. Users should use handle <code>--updateModel</code> in order to update the parameter estimates using the target/gwas panel as well. However, this is NOT necessary in most cases, unless the user has strong reasons to believe that this might increase the imputation accuracy.] |
| + | |
| + | |
| + | = Download = |
| + | |
| + | '''Minimac3 ''' is available as an undocumented release version. The source files are available for download here and commonly used reference panels in <code>M3VCF</code> format are available for download in [[#Reference Panels for Download | Reference Panels]]. |
| + | |
| + | * To Download Minimac3 |
| + | |
| + | {| class="wikitable" border="1" cellpadding="2" |
| + | |- bgcolor="lightgray" |
| + | ! Description |
| + | ! Download Link |
| + | |- |
| + | | Minimac3 Executable |
| + | | [[Media : Minimac3.v1.0.0.binary.tar.gz | UNIX Users ]] |
| + | |- |
| + | | Minimac3-omp Executable (for parallel computing) |
| + | | [[Media : Minimac3.v1.0.0.binary-OMP.tar.gz | UNIX Users ]] |
| + | |- |
| + | | Minimac3 Source Files |
| + | | [[Media : Minimac3.v1.0.0.tar.gz | UNIX Users ]] |
| + | |} |