From Genome Analysis Wiki
Jump to navigationJump to search
5 bytes removed
, 00:43, 29 January 2015
Line 52: |
Line 52: |
| [NOTE: While doing imputation, if parameter estimates are found in <code>M3VCF</code> files, Minimac3 will automatically use them for imputation. Users should use handle <code>--updateModel</code> in order to update the parameter estimates using the target/gwas panel as well. However, this is NOT necessary in most cases, unless the user has strong reasons to believe that this might increase the imputation accuracy.] | | [NOTE: While doing imputation, if parameter estimates are found in <code>M3VCF</code> files, Minimac3 will automatically use them for imputation. Users should use handle <code>--updateModel</code> in order to update the parameter estimates using the target/gwas panel as well. However, this is NOT necessary in most cases, unless the user has strong reasons to believe that this might increase the imputation accuracy.] |
| | | |
− | == Subset Parameters ==
| + | == Subset Parameters == |
| | | |
− | == Starting Parameters ==
| + | == Starting Parameters == |
| | | |
− | == Estimation Parameters ==
| + | == Estimation Parameters == |
| | | |
− | == Other Parameters ==
| + | == Other Parameters == |
| | | |
− | == PhoneHome ==
| + | == PhoneHome == |
| | | |
| = Download = | | = Download = |