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Revision as of 18:37, 10 February 2011
, 18:37, 10 February 2011no edit summary
Within each file, markers should be stored by chromosome position. Alleles should be stored in the forward strand and can be encoded as 'A', 'C', 'G' or 'T' (there is no need to use numeric identifiers for each allele).
Within each file, markers should be stored by chromosome position. Alleles should be stored in the forward strand and can be encoded as 'A', 'C', 'G' or 'T' (there is no need to use numeric identifiers for each allele).
The 1000 Genome pilot project genotypes use NCBI Build 37.
The latest reference panel generated by the 1000 Genomes project uses NCBI Build 37 (HG 19). Make sure that your data is on Build 37, otherwise lift your data over.
=== Reference Haplotypes ===
=== Reference Haplotypes ===
