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, 18:38, 27 August 2012
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| == X Chromosome Imputation == | | == X Chromosome Imputation == |
− | minimac (version 8.6.12 or newer) supports the imputation of genotypes on the X chromosome | + | minimac (version 8.15.12 or newer) supports the imputation of genotypes on the X chromosome |
− | (reference haplotypes can be found [ftp://share.sph.umich.edu/1000genomes/fullProject/2012.03.14/GIANT.chrX.phase1_release_v3.20101123.snps_indels_svs.genotypes.refpanel.ALL.vcf.gz.tgz here] | + | (reference haplotypes can be found [ftp://share.sph.umich.edu/1000genomes/fullProject/2012.03.14/GIANT.chrX.phase1_release_v3.20101123.snps_indels_svs.genotypes.refpanel.ALL.vcf.gz.tgz here]) |
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| === 1. Split the X chromosome pedigree file by sex === | | === 1. Split the X chromosome pedigree file by sex === |