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, 19:25, 16 November 2012
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| * --kinFile let Rare-Metal-Worker read in a kinship matrix from a file. However, the kinship matrix has to be generated using Rare-Metal-Worker previously. | | * --kinFile let Rare-Metal-Worker read in a kinship matrix from a file. However, the kinship matrix has to be generated using Rare-Metal-Worker previously. |
| * --kinSave allows you to save the kinship. | | * --kinSave allows you to save the kinship. |
| + | |
| + | ==== Kinship Options ==== |
| + | * --kinMiss and --kinMaf should be used with --kinGeno together. |
| + | * --kinMiss specifies the maximum genotype missing rate when calculating kinship from genotypes. |
| + | * --kinMaf specifies the minimum minor allele frequency used when calculating kinship from genotypes. |
| | | |
| ==== Chromosome X ==== | | ==== Chromosome X ==== |