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, 13:39, 1 April 2014
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| RAREMETALWORKER automatically stores the score statistics for each marker ( <math> U_i </math>) together with quality information of that marker, including HWE p-value, call rate, and allele counts. | | RAREMETALWORKER automatically stores the score statistics for each marker ( <math> U_i </math>) together with quality information of that marker, including HWE p-value, call rate, and allele counts. |
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− | RAREMETALWORKER also stores the covariance matrices (<math> \mathbf{V} </math>) of the score statistics of markers within a window. | + | RAREMETALWORKER also stores the covariance matrices (<math> \mathbf{V} </math>) of the score statistics of markers within a window, size of which can be specified through command line. |
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| == Modeling Relatedness == | | == Modeling Relatedness == |