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, 02:17, 9 March 2015
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| * --geneMap takes a string describing the path to find mapping file for manhattan plot annotation. | | * --geneMap takes a string describing the path to find mapping file for manhattan plot annotation. |
| * The default is human genome build 19, saved in raremetal/data/refFlat_hg19.txt. | | * The default is human genome build 19, saved in raremetal/data/refFlat_hg19.txt. |
| + | |
| + | ===--mergedVCFID=== |
| + | * This options allows RAREMETALWORKER to recognize VCF samples IDs in "FAMID_PID" format. |
| + | * The default value is OFF, which means VCF sample IDs are consistent with PID field in PED file. |
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| ==PhoneHome== | | ==PhoneHome== |