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| == Basic Usage Instructions == | | == Basic Usage Instructions == |
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− | '''raeMETAL''' is a command line tool. It is typically run from a Linux or Unix prompt by invoking the command <code>raremetal</code>. In the following are descriptions of basic usage for meta analysis. A detailed [[Tutorial:_RareMETAL|'''TUTORIAL''']] with toy data are also available. | + | '''RAREMETAL''' is a command line tool. It is typically run from a Linux or Unix prompt by invoking the command <code>raremetal</code>. In the following are descriptions of basic usage for meta analysis. A detailed [[Tutorial:_RareMETAL|'''TUTORIAL''']] with toy data are also available. |
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| ==== Prepare Input Files==== | | ==== Prepare Input Files==== |
− | '''rareMETAL''' requires the following basic input files: summary statistics and covariance matrices of score statistics generated by '''rareMetalWorker''' or [http://genome.sph.umich.edu/wiki/Rvtests '''rvtests'''], a file with list of studies to be included and a group file if gene-level meta-analysis is expected. | + | '''RAREMETAL''' requires the following basic input files: summary statistics and covariance matrices of score statistics generated by '''rareMetalWorker''' or [http://genome.sph.umich.edu/wiki/Rvtests '''rvtests'''], a file with list of studies to be included and a group file if gene-level meta-analysis is expected. |
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