From Genome Analysis Wiki
Jump to navigationJump to search
160 bytes added
, 14:30, 29 June 2015
Line 40: |
Line 40: |
| score.stat.file <- c("example1.MetaScore.assoc.gz","example2.MetaScore.assoc.gz") | | score.stat.file <- c("example1.MetaScore.assoc.gz","example2.MetaScore.assoc.gz") |
| | | |
− | rareMETALS2.single <- function(score.stat.file,range,alternative=c('two.sided','greater','less'),ix.gold=1,callrate.cutoff=0,hwe.cutoff=0,hwe.ctrl.cutoff=0)
| + | library(rareMETALS) |
| + | res <- rareMETALS2.single(score.stat.file,range="19:42906914-45854919",alternative="two.sided",ix.gold=1,callrate.cutoff=0,hwe.cutoff=0) |
| + | |
| + | rareMETALS2.single <- function(score.stat.file,range,alternative=c('two.sided','greater','less'),ix.gold=1,callrate.cutoff=0,hwe.cutoff=0,hwe.ctrl.cutoff=0) |
| + | |
| '''Relevant Parameters''': | | '''Relevant Parameters''': |
| * '''score.stat.file''' files of score statistics | | * '''score.stat.file''' files of score statistics |