32
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[[Category:RAREMETAL]]
[[Category:RAREMETALWORKER]]
==Main Wiki Page==
==Main Wiki Page==
* The [[RAREMETAL_Change_Log | Change log]]
* [[RAREMETAL_Change_Log | RAREMETAL Change log]]
===Incoming update===
==Reporting a bug==
Please report issues at our GitHub repository [https://github.com/statgen/raremetal/issues issue tracker]. When possible, include your platform (Ubuntu, CentOS, Mac OS, etc), as well as any relevant commands and output that can help us to identify the problem.
* Enable reading from .gz annotated vcf
==Incoming update==
* Add SKAT-O
* Add an option to store group file from vcf
* Solve the numeric issue of lambda = 0 in SKAT
* Take snpeff as annotation input
* When no conditional variant is available, warning is generated but not written to log file.
* enable reading from .gz annotated vcf
* add SKAT-O
* solve the numeric issue of lambda = 0 in SKAT
* In conditional analysis, when cov matrix between the test variant and its conditioned variants is not invertible, MathSVD still tries to invert that matrix and that leads to weird conditional p values.
* '''Optimization for binary traits'''
* '''Memory optimization for gene-based test in large panel'''
