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Revision as of 23:12, 9 October 2021
, 23:12, 9 October 2021no edit summary
[[Image:High-ld.png]]
[[Image:High-ld.png]]
Here is a lost of positions for GRCH Build 37
Here is a list of positions for GRCH Build 38. There positions are provided by the [https://github.com/cran/plinkQC/blob/master/inst/extdata/high-LD-regions-hg38-GRCh38.bed plinkQC R package] and were provided by Anderson2010<ref>Anderson, Carl A., et al. "Data quality control in genetic case-control association studies." Nature protocols 5.9 (2010): 1564-1573.</ref>
<tab border="1" head="top">
Chr Start Stop
chr1 47761740 51761740
chr1 125169943 125170022
chr1 144106678 144106709
chr1 181955019 181955047
chr2 85919365 100517106
chr2 87416141 87416186
chr2 87417804 87417863
chr2 87418924 87418981
chr2 89917298 89917322
chr2 135275091 135275210
chr2 182427027 189427029
chr2 207609786 207609808
chr3 47483505 49987563
chr3 83368158 86868160
chr5 44464140 51168409
chr5 129636407 132636409
chr6 25391792 33424245
chr6 26726947 26726981
chr6 57788603 58453888
chr6 61109122 61357029
chr6 61424410 61424451
chr6 139637169 142137170
chr7 54964812 66897578
chr7 62182500 62277073
chr8 8105067 12105082
chr8 43025699 48924888
chr8 47303500 47317337
chr8 110918594 113918595
chr9 40365644 40365693
chr9 64198500 64200392
chr9 88958735 88959017
chr10 36671065 43184546
chr10 41693521 41885273
chr11 88127183 91127184
chr12 32955798 41319931
chr12 34639034 34639084
chr14 87391719 87391996
chr14 94658026 94658080
chr17 43159541 43159574
chr20 4031884 4032441
chr20 33948532 36438183
chr22 30060084 30060162
chr22 42980497 42980522
</tab>
Here is a list of positions for GRCH Build 37
<tab border="1" head="top">
<tab border="1" head="top">
Chr Start Stop
Chr Start Stop
