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|style="background-color:red;"|
 
|style="background-color:red;"|
 
|-
 
|-
| VTYPE is [AifZH] for SAM and [AcCsSiIfZH]
+
| VTYPE is [AifZH] for SAM and [AcCsSiIfZH] for BAM
 
|style="background-color:red;"|
 
|style="background-color:red;"|
 
|style="background-color:red;"|
 
|style="background-color:red;"|
Line 222: Line 222:  
|style="background-color:red;"|
 
|style="background-color:red;"|
 
|style="background-color:red;"|
 
|style="background-color:red;"|
 +
|-
 +
| For TAG = E2, length should be the same as the Read Length
 +
|style="background-color:red;"|
 +
|style="background-color:red;"|
 +
|style="background-color:red;"|
 +
|style="background-color:red;"|
 +
|-
 +
| For TAG = E2, each base should be different than the read Base (unless 'N')
 +
|style="background-color:red;"|
 +
|style="background-color:red;"|
 +
|style="background-color:red;"|
 +
|style="background-color:red;"|
 +
|-
 +
| For TAG = U2, length should be the same as the Read Length
 +
|style="background-color:red;"|
 +
|style="background-color:red;"|
 +
|style="background-color:red;"|
 +
|style="background-color:red;"|
 +
|-
 
|}
 
|}
  

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