Changes

SeqShop: Aligning Your Own Genome, December 2014 (view source)

482 bytes removed , 15:47, 6 December 2014

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~~== I didn't get sequenced, what can I do? ==~~

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~~I prepared some test files for you.~~

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* I took a 1000g sample and reduced it to 2x.

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** I already created an align.2x.index file for you.

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*** This is a 1000g sample, so the filenames/RG information for these do not match the ones produced by our sequencer that are described below.

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~~To be consistent with everyone else you can do:~~

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~~mkdir ~/personal~~

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~~cp -r /home/mktrost/seqshop/inputs/2x/* ~/personal/.~~

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~~ls ~/personal/~~

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~~ls ~/personal/fastq~~

== I got sequence, how to I get my data ready to run? ==

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