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Revision as of 17:29, 15 May 2015
, 17:29, 15 May 2015→Running GotCloud/GenomeSTRiP Metadata Pipeline
In principle, the metadata can be created from the input BAM files by running the following command
In principle, the metadata can be created from the input BAM files by running the following command
'''WAIT!!!!! DO NOT RUN THIS COMMAND, because it will take >1 hour to finish'''.
'''WAIT!!!!! DO NOT RUN THIS COMMAND, because it will take >1 hour to finish'''.
perl ${GC}/bin/genomestrip.pl --run-metadata --conf ${SS}/gotcloud.conf --numjobs 12 --base-prefix ${SS} --outdir ${OUT}
Instead, let's look what the output would have looked like.
Instead, let's look what the output would have looked like.
