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Revision as of 16:14, 12 December 2014
, 16:14, 12 December 2014→Exonic Variants NOT found by 1000G
If you are interested in rare variants that are not identified by 1000G, you can extract them by running
If you are interested in rare variants that are not identified by 1000G, you can extract them by running
zcat $OUT/wgs.filtered.rsid.anno.exon.vcf.gz | grep "EXTFILTER=NA,NA" | grep -v -w "0/0" | grep -v "less"
zcat $OUT/wgs.filtered.rsid.anno.exon.vcf.gz | grep "EXTFILTER=NA,NA" | grep -v -w "0/0" | less
For example,
For example,
