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SeqShop: Calling Your Own Genome, December 2014 (view source)

Revision as of 12:38, 8 December 2014

335 bytes removed ,  12:38, 8 December 2014
→‎Setup
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As it says, press <code>Space</code> or <code>Return</code>.
 
As it says, press <code>Space</code> or <code>Return</code>.
 
* It should now look basically the same as your normal command line.
 
* It should now look basically the same as your normal command line.
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You can now start your alignment:
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/home/mktrost/seqshop/gotcloud/gotcloud align --conf ~/personal/gotcloud.2x.conf --numjobs 1
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Yes, leave that as /home/mktrost/seqshop/gotcloud/gotcloud - that is where gotcloud is installed.  The ~/... points GotCloud to your specific configuration file.
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You should now see your alignment running:
      
;Want to log out and leave your job running?
 
;Want to log out and leave your job running?
Retrieved from "http://genome.sph.umich.edu/wiki/Special:MobileDiff/12213"

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