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Revision as of 12:47, 11 December 2014
, 12:47, 11 December 2014→Setup your run environment
* Setup an output directory
* Setup an output directory
** It will leave your output directory from the previous tutorial in tact.
** It will leave your output directory from the previous tutorial in tact.
source /net/seqshop-server/home/hmkang/seqshop/setup.txt
source /net/seqshop-server/home/mktrost/seqshop/setup.txt
* You won't see any output after running <code>source</code>
* You won't see any output after running <code>source</code>
** It silently sets up your environment
** It silently sets up your environment
** If you want to view the detail of the setup, type
** If you want to view the detail of the setup, type
less /net/seqshop-server/home/hmkang/seqshop/setup.txt
less /net/seqshop-server/home/mktrost/seqshop/setup.txt
and press 'q' to finish.
and press 'q' to finish.
View setup.txt
View setup.txt
<div class="mw-collapsible-content" style="width:800px">
<div class="mw-collapsible-content" style="width:800px">
export GC=/net/seqshop-server/home/hmkang/seqshop/gotcloud
export GC=/net/seqshop-server/home/mktrost/seqshop/gotcloud
export IN=/net/seqshop-server/home/hmkang/seqshop/inputs
export SS=/net/seqshop-server/home/mktrost/seqshop/example
export EPACTS=/net/seqshop-server/home/mktrost/seqshop/epacts
export EPACTS=/net/seqshop-server/home/hmkang/seqshop/epacts
export OUT=~/out
export OUT=~/out
mkdir -p ${OUT}
mkdir -p ${OUT}
