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Revision as of 10:56, 16 December 2014
, 10:56, 16 December 2014→Setup when running on your own outside of the SeqShop Workshop
cd ~/seqshop/
cd ~/seqshop/
* download, decompress, and build the version of gotcloud that was tested with this tutorial:
* download, decompress, and build the version of gotcloud that was tested with this tutorial:
wget https://github.com/statgen/gotcloud/archive/gotcloud.workshop.tar.gz
wget https://github.com/statgen/gotcloud/archive/gotcloud.workshopDec2014.tar.gz
tar xvf gotcloud.workshop.tar.gz
tar xvf gotcloud.workshopDec2014.tar.gz
mv gotcloud-gotcloud.workshop gotcloud
mv gotcloud-gotcloud.workshopDec2014 gotcloud
cd gotcloud/src
cd gotcloud/src
make
make
=== Download the example data ===
=== Download the example data ===
Download and untar file containing the example data used in the practicals:
Download and untar file containing the example data used in the practicals:
wget http://www.sph.umich.edu/csg/mktrost/seqshopExample.tar.gz
wget http://www.sph.umich.edu/csg/mktrost/seqshopExampleDec2014.tar.gz
tar xvf seqshopExample.tar.gz
tar xvf seqshopExampleDec2014.tar.gz
You will see the names of all the files included in the example data scrolling on the screen as they are unpacked from the tar file.
You will see the names of all the files included in the example data scrolling on the screen as they are unpacked from the tar file.
