Changes

From Genome Analysis Wiki
Jump to navigationJump to search
Line 49: Line 49:  
=== Download the example data ===
 
=== Download the example data ===
 
Download and untar file containing the example data used in the practicals:
 
Download and untar file containing the example data used in the practicals:
  wget http://www.sph.umich.edu/csg/mktrost/seqshopExampleDec2014.tar.gz
+
mkdir -p ~/seqshop
 +
cd ~/seqshop
 +
  wget http://csg.sph.umich.edu/mktrost/seqshopExampleDec2014.tar.gz
 
  tar xvf seqshopExampleDec2014.tar.gz
 
  tar xvf seqshopExampleDec2014.tar.gz
   Line 56: Line 58:  
=== Download & Build GotCloud ===
 
=== Download & Build GotCloud ===
 
If you do not already have GotCloud:
 
If you do not already have GotCloud:
* cd to where you want GotCloud installed (you can change this to any directory you want)
  −
mkdir -p ~/seqshop
  −
cd ~/seqshop/
   
* download, decompress, and build the version of gotcloud that was tested with this tutorial:
 
* download, decompress, and build the version of gotcloud that was tested with this tutorial:
 
  wget https://github.com/statgen/gotcloud/archive/gotcloud.1.15.tar.gz
 
  wget https://github.com/statgen/gotcloud/archive/gotcloud.1.15.tar.gz
Line 488: Line 487:     
''This section is specifically for the SeqShop Workshop computers.''
 
''This section is specifically for the SeqShop Workshop computers.''
<div class="mw-collapsible" style="width:600px">
+
<div class="mw-collapsible mw-collapsed" style="width:600px">
 
''If you are not running during the SeqShop Workshop, please skip this section.''
 
''If you are not running during the SeqShop Workshop, please skip this section.''
 
<div class="mw-collapsible-content">
 
<div class="mw-collapsible-content">
Line 500: Line 499:  
</div>
 
</div>
 
</div>
 
</div>
 +
 +
== Return to Workshop Wiki Page ==
 +
Return to main workshop wiki page: [[SeqShop: December 2014]]

Navigation menu