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Revision as of 23:43, 16 June 2014
, 23:43, 16 June 2014→Reference Files
If you want to access the FASTA file by position, you can use <code>samtools faidx</code> command
If you want to access the FASTA file by position, you can use <code>samtools faidx</code> command
$GC/bin/samtools faidx $REF/human.g1k.v37.chr22.fa 22:36000000 | less
or
$GC/bin/samtools faidx $REF/human.g1k.v37.chr22.fa 22:36000000-36000100
$GC/bin/samtools faidx $REF/human.g1k.v37.chr22.fa 22:36000000-36000100
