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${BIN}/samtools-hybrid view ${OUT}/NA12878.exon-targetted.ILLUMINA.chr20.19986kb-20281kb.deduped.bam | less
${BIN}/samtools-hybrid view ${OUT}/NA12878.exon-targetted.ILLUMINA.chr20.19986kb-20281kb.deduped.bam | less
7. INDEX THE ALIGNMENT FOR RANDOM ACCESS OF THE BAM
7. INDEX THE ALIGNMENT FOR RANDOM ACCESS OF THE BAM
${BIN}/samtools-hybrid tview ${OUT}/NA12878.exon-targetted.ILLUMINA.chr20.19986kb-20281kb.deduped.bam ${REF}/human_g1k_v37_chr20.fa
${BIN}/samtools-hybrid tview ${OUT}/NA12878.exon-targetted.ILLUMINA.chr20.19986kb-20281kb.deduped.bam ${REF}/human_g1k_v37_chr20.fa
TYPE 'g' and 20:20000000
9. QUALITY CHECKING USING QPLOT
9. QUALITY CHECKING USING QPLOT
