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3. Merge multiple BAMs into one
 
3. Merge multiple BAMs into one
  ${BIN}/samtools-hybrid merge ${OUT}/NA12878.exon.sample.merged.bam \
+
  ${BIN}/samtools-hybrid merge ${OUT}/NA12878.exon.sample.merged.bam ${OUT}/NA12878.exon.sample.paired.bwa.sorted.bam  ${OUT}/NA12878.exon.sample.unpaired.bwa.sorted.bam
  ${OUT}/NA12878.exon.sample.paired.bwa.sorted.bam  \
  −
  ${OUT}/NA12878.exon.sample.unpaired.bwa.sorted.bam
       

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