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= Quality Control Utilities =
= Quality Control Utilities =
[[C++ Executable: fastQValidator|FastQValidator]] -- Check that a FASTQ file conforms to specification.
Check that a FASTQ file conforms to specification.
[[BamIdentityCheck]] -- Check that mapped reads are consistent with known genotypes for each individual.
Check that mapped reads are consistent with known genotypes for each individual.
= File Readers =
== File Readers ==
[[C++ Library: libbam|BamFile]] -- Reads a BAM/SAM file.
Reads a BAM/SAM file.
[[C++ Library: libfqf|FastQFile]] -- Read a FASTQ file sequence by sequence. Validating the sequence as it is read.
== File Conversion ==
[[bam2FastQ]] -- Convert BAM files into FastQ files
= [[Links to Sequence Analysis Tools|Other Useful Links]] =
= [[Links to Sequence Analysis Tools|Other Useful Links]] =
