User contributions
9 December 2014
SeqShop: Ancestry On Your Own Genome, December 2014
Population information
SeqShop: Ancestry On Your Own Genome, December 2014
Estimate ancestry
-1
SeqShop: Ancestry On Your Own Genome, December 2014
Visualizing Ancestry
+4
SeqShop: Ancestry On Your Own Genome, December 2014
Visualizing Ancestry
+79
SeqShop: Ancestry On Your Own Genome, December 2014
Estimate ancestry
+77
SeqShop: Ancestry On Your Own Genome, December 2014
Visualizing Ancestry
+209
SeqShop: Ancestry On Your Own Genome, December 2014
Interested in looking just at European/East Asian/Central South Asian populations?
+565
SeqShop: Ancestry On Your Own Genome, December 2014
Interested in looking just at European (or East Asian or Central South Asian) populations?
-8
SeqShop: Ancestry On Your Own Genome, December 2014
Population information
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
HGDP reference panel
SeqShop: Ancestry On Your Own Genome, December 2014
Population information
+89
SeqShop: Ancestry On Your Own Genome, December 2014
Population information
+2
SeqShop: Ancestry On Your Own Genome, December 2014
Interested in looking just at European populations?
+659
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
HGDP reference panel
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
HGDP reference panel
-4
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
HGDP reference panel
-5
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
LASER workflow
+125
File:HGDP Popualtions.png
no edit summary
SeqShop: Ancestry On Your Own Genome, December 2014
Estimate ancestry
-12
SeqShop: Ancestry On Your Own Genome, December 2014
Step 2: pileup --> seq
+1
SeqShop: Ancestry On Your Own Genome, December 2014
Step 2: pileup --> seq
-6
SeqShop: Ancestry On Your Own Genome, December 2014
Step 2: pileup --> seq
-127
SeqShop: Ancestry On Your Own Genome, December 2014
Visualizing Ancestry
-3
SeqShop: Ancestry On Your Own Genome, December 2014
Estimate ancestry
-6
SeqShop: Ancestry On Your Own Genome, December 2014
Step 2: pileup --> seq
-2
SeqShop: Ancestry On Your Own Genome, December 2014
Step 1: bam --> pileup
+25
8 December 2014
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
Step 1: Estimate ancestry for sequenced samples
-20
SeqShop: Ancestry On Your Own Genome, December 2014
Step 1: bam --> pileup
+7
SeqShop: Ancestry On Your Own Genome, December 2014
Setup
+134
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
Visualizing results
-6
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
Step 1: Estimate ancestry for sequenced samples
+20
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
Estimating ancestry coordinates
-18
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
Step 2: pileup --> seq
-11
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
Step 2: pileup --> seq
+5
7 December 2014
30 July 2014
26 June 2014
19 June 2014
18 June 2014
SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Step 1: bam --> pileup
+1
SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Step 1: bam --> pileup
+123
SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Visualizing results
-14
SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Visualizing results
SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Visualizing results
-10
SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Step 1: bam --> pileup
+2
SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Step 1: bam --> pileup
+24
SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Getting started
-4
SeqShop: Estimates of Genetic Ancestry Practical, June 2014
Visualizing results
-6
