User contributions
From Genome Analysis Wiki
Jump to navigationJump to search- 09:37, 26 November 2012 diff hist +13 N File:666.2012.01.pdf Version zero!
- 09:37, 26 November 2012 diff hist +89 Biostatistics 666: Main Page →Class Notes
- 02:08, 21 November 2012 diff hist 0 Biostatistics 666: Main Page →Class Notes
- 02:07, 21 November 2012 diff hist 0 File:666.2011.02.pdf uploaded a new version of "File:666.2011.02.pdf": →Minor update; added empirical distribution of read pair distances from QPLOT current
- 02:06, 21 November 2012 diff hist 0 File:666.2010.05.pdf uploaded a new version of "File:666.2010.05.pdf": →Minor typo fixes current
- 21:09, 16 November 2012 diff hist -14 RAREMETALWORKER Minor typos fixed
- 00:32, 14 November 2012 diff hist 0 File:666.2010.04.pdf uploaded a new version of "File:666.2010.04.pdf": Minor updates, adding Ion Torrent as a sequencing technology and adding some specific numbers to illustrate the scale of genetic variation that can be reached by sequencing. current
- 06:33, 12 November 2012 diff hist 0 File:666.2010.03.pdf uploaded a new version of "File:666.2010.03.pdf": Adds a summary slide. current
- 06:26, 12 November 2012 diff hist 0 Biostatistics 666: Main Page →Class Notes
- 03:33, 31 October 2012 diff hist 0 File:666.17.pdf uploaded a new version of "File:666.17.pdf" current
- 03:33, 31 October 2012 diff hist 0 File:666.16.pdf uploaded a new version of "File:666.16.pdf": Minor typo fix. current
- 03:07, 29 October 2012 diff hist 0 File:666.16.pdf uploaded a new version of "File:666.16.pdf": Fixed look of slides with equations.
- 02:08, 29 October 2012 diff hist -3 Biostatistics 666: Linkage Analysis in Sibling Pairs →Recommended Reading
- 05:24, 22 October 2012 diff hist 0 File:666.2010.02.pdf uploaded a new version of "File:666.2010.02.pdf": Updated lecture to include example from an actual affected sibling pair study. The lecture is still far too long. current
- 06:16, 3 October 2012 diff hist 0 File:666.12.pdf uploaded a new version of "File:666.12.pdf": Minor edits. current
- 02:25, 26 September 2012 diff hist 0 File:666.10.pdf uploaded a new version of "File:666.10.pdf": Minor tweaks. Now explicitly mentions use of the E-M algorithm to estimate subpopulations and their frequencies or for calling genotype clusters. current
- 23:05, 18 September 2012 diff hist 0 File:666.06.pdf uploaded a new version of "File:666.06.pdf" current
- 08:40, 10 September 2012 diff hist 0 File:666.03.pdf uploaded a new version of "File:666.03.pdf": Minor updates. current
- 02:15, 5 September 2012 diff hist 0 File:2011.666.01.pdf uploaded a new version of "File:2011.666.01.pdf": Yet more minor edits, this time listing potential group projects. current
- 02:07, 5 September 2012 diff hist 0 File:2011.666.01.pdf uploaded a new version of "File:2011.666.01.pdf": Minor update for 2012, adding more detail to HWE discussion, link to online class notes, and potential discussion of grading scheme
- 02:02, 5 September 2012 diff hist 0 File:2011.666.01.pdf uploaded a new version of "File:2011.666.01.pdf"
- 01:17, 5 September 2012 diff hist +46 Biostatistics 666: Main Page →Course History
- 01:16, 5 September 2012 diff hist +103 Biostatistics 666: Main Page →Course History
- 01:12, 5 September 2012 diff hist +116 Biostatistics 666: Main Page →Standards of Academic Conduct
- 01:11, 5 September 2012 diff hist +12 Biostatistics 666: Main Page →Course History
- 01:11, 5 September 2012 diff hist -16 Biostatistics 666: Main Page →Office Hours
- 01:10, 5 September 2012 diff hist -169 Biostatistics 666: Main Page →Scheduling
- 01:08, 5 September 2012 diff hist +19 Biostatistics 666: Main Page →Objective
- 01:07, 5 September 2012 diff hist -167 Biostatistics 666: Main Page →Problem Set Solutions
- 10:46, 8 June 2012 diff hist -18 Minimac →Running Minimac
- 15:55, 1 June 2012 diff hist +230 Nm User talk:Michael Welcome! current
- 15:55, 1 June 2012 diff hist +318 Nm User:Michael Creating user page with biography of new user. current
- 15:53, 1 June 2012 diff hist +333 Karma
- 10:34, 13 April 2012 diff hist +16 Abecasis Group Awards →Goncalo's Awards
- 10:33, 13 April 2012 diff hist +131 Abecasis Group Awards →Goncalo's Awards
- 15:02, 5 April 2012 diff hist +80 Short Workshops
- 05:27, 8 February 2012 diff hist +1 TrioCaller →Converting Alignments to BAM format
- 05:24, 8 February 2012 diff hist +6 TrioCaller →Genotype Refinement Using Linkage Disequilibrium Information (TrioCaller)
- 05:23, 8 February 2012 diff hist -92 TrioCaller →Genotype Refinement Using Linkage Disequilibrium Information (TrioCaller)
- 05:22, 8 February 2012 diff hist +102 TrioCaller →Genotype Refinement Using Linkage Disequilibrium Information (TrioCaller)
- 05:20, 8 February 2012 diff hist +135 TrioCaller →Alternative way to call variants
- 05:18, 8 February 2012 diff hist -8 TrioCaller →Initial set of variant calls
- 05:16, 8 February 2012 diff hist -405 TrioCaller →Mapping Reads to The Genome
- 05:11, 8 February 2012 diff hist +91 TrioCaller →Building an Index for Short Read Alignment
- 05:09, 8 February 2012 diff hist -61 TrioCaller →Required Software
- 05:02, 8 February 2012 diff hist +9 TrioCaller →Download with example datasets
- 07:42, 23 January 2012 diff hist +380 N ThunderVCF Created page with 'This a modified version of MACH, designed for the accurate genotyping of low pass sequence data from unrelated individuals and included in the UMAKE download. The tool requi…' current
- 07:37, 23 January 2012 diff hist +287 Tutorial: Low Pass Sequence Analysis →Example Dataset
- 07:32, 23 January 2012 diff hist 0 Tutorial: Low Pass Sequence Analysis →Example Dataset
- 17:56, 20 January 2012 diff hist +523 Tutorial: Low Pass Sequence Analysis →Mapping Reads to The Genome