User contributions
17 December 2014
SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014
Comparison with other data sets
SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014
Comparison with other data sets
SeqShop: Variant Calling and Filtering for INDELs Practical, December 2014
no edit summary
File:SplitOut.png
Mktrost uploaded a new version of "File:SplitOut.png"
File:SnpcallDiagramNew.png
Mktrost uploaded a new version of "File:SnpcallDiagramNew.png"
SeqShop: Variant Calling and Filtering for SNPs Practical, December 2014
no edit summary
SeqShop: Sequence Mapping and Assembly Practical, December 2014
Logging Off
+13
File:GcConfNew.png
Mktrost uploaded a new version of "File:GcConfNew.png"
SeqShop: Sequence Mapping and Assembly Practical, December 2014
Setup when running on your own outside of the SeqShop Workshop
-113
SeqShop: Sequence Mapping and Assembly Practical, December 2014
Setup when running on your own outside of the SeqShop Workshop
+1
SeqShop: Sequence Mapping and Assembly Practical, December 2014
Download & Build GotCloud
-33
File:Dec2014 SeqShop - GotCloud snpcall.pdf
Mktrost uploaded a new version of "File:Dec2014 SeqShop - GotCloud snpcall.pdf"
16 December 2014
GotCloud: Versions
no edit summary
+1,704
File:RefDir.png
Mktrost uploaded a new version of "File:RefDir.png"
File:RefDir.png
Mktrost uploaded a new version of "File:RefDir.png"
SeqShop: Sequence Mapping and Assembly Practical, December 2014
Setup when running on your own outside of the SeqShop Workshop
+35
SeqShop: Sequence Mapping and Assembly Practical, December 2014
no edit summary
15 December 2014
SeqShop: Calling Your Own Genome, December 2014
Wednesday FEEDBACK!
-191
SeqShop: Calling Your Own Genome, December 2014
Tuesday FEEDBACK!
-175
SeqShop: Calling Your Own Genome, December 2014
WORKSHOP FEEDBACK!
-170
12 December 2014
SeqShop: Calling Your Own Genome, December 2014
Exonic Variants NOT found by 1000G
+48
SeqShop: Calling Your Own Genome, December 2014
Exonic Variants NOT found by 1000G
+181
SeqShop: Calling Your Own Genome, December 2014
Exonic Variants NOT found by 1000G
+18
SeqShop: Calling Your Own Genome, December 2014
Exonic Variants NOT found by 1000G
+125
SeqShop: Calling Your Own Genome, December 2014
Exonic Variants NOT found by 1000G
+277
SeqShop: Calling Your Own Genome, December 2014
Exonic Variants NOT found by 1000G
+1
SeqShop: Calling Your Own Genome, December 2014
Annotation / Lookup against dbSNP
+246
SeqShop: Calling Your Own Genome, December 2014
Annotation / Lookup against dbSNP
+1
SeqShop: Ancestry On Your Own Genome, December 2014
Visualizing Ancestry
-75
SeqShop: Ancestry On Your Own Genome, December 2014
Looking at Calling results
-100
11 December 2014
SeqShop: December 2014
no edit summary
-97
SeqShop: Ancestry On Your Own Genome, December 2014
Return to Calling your own Genome
-36
SeqShop: Calling Your Own Genome, December 2014
Return to SeqShop: Ancestry On Your Own Genome, December 2014
-34
SeqShop: Calling Your Own Genome, December 2014
Friday
-625
SeqShop: Genetic Association Analysis Practical, December 2014
no edit summary
+164
SeqShop: Ancestry On Your Own Genome, December 2014
Run
+314
SeqShop: Calling Your Own Genome, December 2014
WORKSHOP FEEDBACK!
-1
SeqShop: Ancestry On Your Own Genome, December 2014
Step 1: bam --> pileup
+22
SeqShop: Ancestry On Your Own Genome, December 2014
Step 1: bam --> pileup
-16
SeqShop: Ancestry On Your Own Genome, December 2014
no edit summary
+718
SeqShop: Calling Your Own Genome, December 2014
no edit summary
SeqShop: December 2014
no edit summary
+44
File:Seqshop genetic association analysis 141211.pdf
no edit summary
SeqShop: Calling Your Own Genome, December 2014
Checking Completion
+36
10 December 2014
SeqShop: Calling Your Own Genome, December 2014
Friday: Reviewing SNPCALL Results
+169
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
Step 1: bam --> pileup
SeqShop: Estimates of Genetic Ancestry Practical, December 2014
Getting started
+2
SeqShop: Ancestry On Your Own Genome, December 2014
Return to Calling your own Genome
+60
SeqShop: Calling Your Own Genome, December 2014
Friday
+200
SeqShop: Ancestry On Your Own Genome, December 2014
Step 1: bam --> pileup
+217
