User contributions
15 October 2010
Thunder
no edit summary
+77
Thunder
no edit summary
+413
Thunder
no edit summary
+87
Thunder
no edit summary
+251
Thunder
Created page with 'This page documents how to perform variant calling from low-coverage sequencing data using glfmultiples and thunder. == Input Data == To get started, you will need bam files in…'
8 August 2010
28 June 2010
24 June 2010
MaCH FAQ
How do I interpret the imputation quality estimates?
+24
MaCH FAQ
How do I interpret the imputation quality estimates?
-33
File:Figure3.pdf
no edit summary
MaCH FAQ
How do I get imputation quality estimates?
+993
MaCH FAQ
How do I get imputation quality estimates?
+55
23 June 2010
22 June 2010
CalcMatch
no edit summary
-1
CalcMatch
example command lines
m-1
CalcMatch
example command lines
+866
CalcMatch
no edit summary
+6
CalcMatch
no edit summary
+24
CalcMatch
no edit summary
+6
CalcMatch
no edit summary
+116
CalcMatch
Created page with 'CalcMatch is a C/C++ software developed by Yun Li that compares two sets of pedigree files. It was initially written to compare imputed genotypes with their true/experimental cou…'
17 June 2010
MaCH Options
Created page with '== greedy == use only the reference haplotypes (fed to -h or --haps) as reference == states S == use a random subset of S haplotypes as reference == sampleInterval SI == out…'
MaCH
no edit summary
+32
9 June 2010
MaCH FAQ
no edit summary
+146
MaCH FAQ
How long does imputation take?
+88
MaCH FAQ
Why and how to perform a 2-step imputation?
+153
MaCH FAQ
How long does imputation take?
+112
4 June 2010
25 May 2010
MaCH
no edit summary
+14
MaCH
no edit summary
+25
MaCH
no edit summary
+42
MaCH
no edit summary
+501
MaCH
no edit summary
+110
24 May 2010
MaCH
no edit summary
-71
MaCH
More questions?
+78
MaCH
no edit summary
+107
MaCH
no edit summary
+15
MaCH
no edit summary
+2
MaCH
no edit summary
-21
MaCH
no edit summary
-30
MaCH
no edit summary
+1,162
21 May 2010
20 May 2010
MaCH
no edit summary
+20
MaCH
no edit summary
-36
MaCH
no edit summary
MaCH
no edit summary
-6
MaCH
no edit summary
+8
MaCH
no edit summary
+14
MaCH
no edit summary
+163
