User contributions
3 November 2011
4 August 2011
29 July 2011
MaCH FAQ
Do I always have to sort the pedigree file by marker position?
-117
MaCH FAQ
How do I get reference files for an region of interest?
+166
11 July 2011
19 June 2011
6 June 2011
15 February 2011
10 February 2011
8 February 2011
Thunder
Important Filters
+28
Thunder
flanking sequence filter
+39
Thunder
Important Filters
+166
Thunder
total depth filter
Thunder
no edit summary
+92
28 January 2011
15 January 2011
11 January 2011
9 January 2011
7 December 2010
Mach DAC
no edit summary
+93
Mach DAC
Post Phasing/Imputation Ligation
+10
Mach DAC
no edit summary
+94
SplitRef
Created page with 'This page documents the splitRef program, which splits a reference haplotype file into smaller files with subsets of markers. == Input Files == === Required Input Files === ====…'
5 December 2010
29 November 2010
Mach DAC
no edit summary
-95
Mach DAC
no edit summary
+414
Mach DAC
no edit summary
+109
SplitPed
Example Commands
+181
SplitPed
no edit summary
+123
SplitPed
Example Commands
+140
SplitPed
no edit summary
+781
SplitPed
Created page with 'This page documents the splitPed program, which splits a pedigree file into smaller files with subsets of markers. == Input Files == === Required Input Files === ==== Pedigree f…'
Mach DAC
no edit summary
+660
MaCH: machX
no edit summary
+437
Thunder
no edit summary
+74
MaCH FAQ
no edit summary
+140
28 November 2010
MaCH FAQ
Why and how to perform a 2-step imputation?
+4
Mach DAC
Created page with 'This is the MaCH Divide and Conquer page, documenting how to break the genome into smaller pieces before imputation/phasing and how to ligate after imputation/phasing.'
MaCH FAQ
no edit summary
+642
MaCH FAQ
Why and how to perform a 2-step imputation?
-1
MaCH FAQ
Why and how to perform a 2-step imputation?
+59
26 November 2010
MaCH: machX
Impute
+281
MaCH: machX
Phase Your Own Data
+260
MaCH: machX
Reference Haplotypes
-11
MaCH: machX
no edit summary
+12
MaCH: machX
no edit summary
+12
MaCH: machX
no edit summary
-1
