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, 22:53, 17 November 2010
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− | >== Read mappers that we like are ==
| + | == Read mappers that we like are == |
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| [[Karma]] - Currently under development here in Michigan; trades memory for speed, but is both fast and sensitive (now matches or exceeds both bwa and NovoAlign), and highly effective on nodes with high core counts. | | [[Karma]] - Currently under development here in Michigan; trades memory for speed, but is both fast and sensitive (now matches or exceeds both bwa and NovoAlign), and highly effective on nodes with high core counts. |
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| All of these should output [[SAM]] format. | | All of these should output [[SAM]] format. |
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− | =[http://ekydewequ.co.cc UNDER COSTRUCTION, PLEASE SEE THIS POST IN RESERVE COPY]=
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− | =[http://ekydewequ.co.cc CLICK HERE]=
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− | </div>
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| == Other Aligners == | | == Other Aligners == |
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| [http://maq.sourceforge.net/ MAQ] - The venerable short read aligner developed by Richard Durbin and Heng Li. | | [http://maq.sourceforge.net/ MAQ] - The venerable short read aligner developed by Richard Durbin and Heng Li. |