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58 bytes added
, 12:55, 2 September 2011
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| The bam executable has the following functions. | | The bam executable has the following functions. |
| * [[C++ Executable: bam#validate|validate - Read and Validate a SAM/BAM file]] | | * [[C++ Executable: bam#validate|validate - Read and Validate a SAM/BAM file]] |
− | * [[BamUtil: convert|convert - Read a SAM/BAM file and write as a SAM/BAM file]] | + | * [[BamUtil: convert|convert - Read a SAM/BAM file and write as a SAM/BAM file (optionally converts between '=' & bases in the sequence)]] |
| * [[C++ Executable: bam#dumpHeader|dumpHeader - Print SAM/BAM header]] | | * [[C++ Executable: bam#dumpHeader|dumpHeader - Print SAM/BAM header]] |
| * [[C++ Executable: bam#splitChromosome|splitChromosome - Split BAM by Chromosome]] | | * [[C++ Executable: bam#splitChromosome|splitChromosome - Split BAM by Chromosome]] |